Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00389 ATGAATTTGGTCAGGGAACTGGAAAAGGACTTGAGGATTGCCAATATCATTTGCATGAATGGAAGAAGACACTTGACCTCATCTATGAATGAAGTTTCGAGGGATCTTATTGTAAATTCTTATTCCAAAGAGAAACAAGCTCTACTGGACCTGCTTCCAATTTTGGCTGAGCTTCAACGTGCATTGGACATGCAATCAACACTTGAATCACTTGCTGAGGAGGGGAATTATTGCAAGGCATTTCAAGTTCTATCTGAATTTCTGCAACTCTTAGATAGTTTGTCAGAACTTTCAGCAATACAAGAGATGACTCGGGGTGTGGAGGTTTGGCTGGGAAAAACTCTACAAAAGCTGGATGCTCTTTTGTTGGGAGTTTGTCAGGAATTTAAGGAAGATAGCTACATAACTGTAATTGATGCCTACGCATTAATTGGGGATGTTACTGGTCTTGCCGAAAAGATACAGAGTTTCTACATGCAAGAAGTTATCTCAGAAACCCACTCTGTGTTGAAGGCTGTTGTGTATGAGGATGAGGAGGAATCTTTGCAAAATAGTAGGCTGACTTACAGTGACTTATGCCTTCAAATATCCGAATCTAAGTTTAGGCTATGCTTATTAAGAACATTAGCTGTTCTATTTGAGCTTATGCATTCATACCATGAAATTATGGAGTTTCAGTTGGATAGACAGGACGCAGCAGGCCAGACTTCAAATAAAAACAATGATGATGTTTCCTGTAGTCTGGGTGGGGCTGGGGAGGTTGATGCAGATGTAAGAATTCGCAGCATCTCTTTTTCCAGTTCTGGAGATGAAATTCATGGTTCATCTTCAAGAGAAGAATCTGAAACAGCCAGCTCACTCGTTGAAACTTCCAACTCTACTGCTTTACCATGTACAGATTCGCATGATCCAGATTATGATGCAAGAAAGGAGGATAATGCAGCATCAAGCATTGAGTCCCCTTGGTACCATCTGCGCAAAGAAGCTACAGAATTTGTTTCACAGACCCTTCAACGAGGACGCAAGAATCTTTGGCATCTCACTACTAGCCGCGTTTCAGTATTGCTTTCCGCTGATGCAGCTTGTACCACAAGCATTCACCAATTCTTGAAAAATTATGAAGATCTTAGTGTCTTCATTTTGGCTGGGGAAGCCTTTTGCGGAATTGAAGCAGTTGAGTTTAGGCAGAAATTGAAGGTGGTTTGTGAAAACTATTTCATAGCCTTTCATCGACAAAACATTCATGCACTCAAAATGGTGTTGGAGAGAGAGACATGGTTAAAATTACCGCCGGATACAGTGCAAATGATAAGCTTTTCAGGACTCGTTGGTGATGGAGCACCTTTGATTTCTATGTCTAACCACAAATCAATTAATCCCAGTGCAACTGACACCGATAAATCAGTGAACTTGGTTCACAGTCACAACAGCTCTAGGAAAAGTGGTTTCTCTTGTTGGATTCAAAATGGAAATCCATTTTTGCAGAAATTATCAAGCCCTAGAGAAGGCCATTGTTCCTCACAATCGAATGGATCGCCTTATGGTGAACATGATGGGAATTCAAAGCGCAATTTTTATGGTGATAAAGTCTTGCCTGGAAAGAATGATTCCACTCAAATGAATGGTGCTAATTCAATTTCAGATGATGAAAATGAGGATCTTCTGGCAGACTTTATTGATGAAGACAGTCAACTTCCTAGTCGAAGTTCAAAACCCAATCACCCAAGAAGAAAGTCATTACATTGTAATGATGAAGAAAATACAGCACAGACTGGTTCTTCTCTAAGTCTTTTAAGATCTATGGATAAATATGCAAGGCTTATGCAGAAATTAGAAGTAGTAAATGTTGAATTCTTTAAGGGAATTTGCCAGTTATTTGAGATTTTTTTCAATTTTGTATTTGAAACATTTGGTCAACATAACACTGTTTTCAATGGAAAAGGTTCGACTGATTCTCTTAACTATCGGCTAAGGACAGCCTCATCTAAAATAACACAAGATTGCGATCAGTGGATAAAGCCCCCATCATCTTCACCTACTTCAGCATTTGTACATTCAGAGGTAACACCTGCTAGCCCTCCTAGCACAAATTTGGGCAACTCTGCACCGACATCTTTGGGTCTTAAGGAAAGATGTGTCGCTGTTGACACTATATCACTTGTTGCTCGAATATTGAATAGATCCAAAGCTCATCTCCAATCAATGCTTTTGCAAAGTAAAGCTACTGTACTTGAGGATTTCTATCAGCATCTGGTGGATGTCGTACCAGATCTTGCAGAGCATATTCATAGGACAACGGCAAGACAACTACTGCACATCAATGGGTATGTGGAACGTGTTGCGAATTGTAGATGGGATGTAAAAGAGCTCGGACTTGAGCATAATGGGTATGTTGATTTGTTGCTTGGAGAATTTAAGCACTATAAAACACGTCTTGCTCATGGGGGAATTCGACAAGAGATTCAAGACCTGCTATTAGAATATGGACTTGAAATTGTGGCGGAAACTCTTGTAGAAGGACTTTCACGGGTAAAGAGATGCAGTGATGAAGGCCGGGCTTTGATGTCATTGGATCTGCAGGTTTTAATCAATGGACTGCATCATTTCGTGTCCATGAATGTGAAGCCCAAGCTACAAATGGTTGAAACCTTCATTAAGGCTTACTATCTTCCAGAGACGGAATTTGTGCACTGGGCCCGCGCGCACCCTGAATACACTAAAAGTCAGATTATTGGGTTGATACACCTCGTTGCTACGATGAAAAGTTGGAAGAGAAAAACCAGGTTGGAAGTCTTGGAAAAGATTGAGTGA 2811 0.4048 MNLVRELEKDLRIANIICMNGRRHLTSSMNEVSRDLIVNSYSKEKQALLDLLPILAELQRALDMQSTLESLAEEGNYCKAFQVLSEFLQLLDSLSELSAIQEMTRGVEVWLGKTLQKLDALLLGVCQEFKEDSYITVIDAYALIGDVTGLAEKIQSFYMQEVISETHSVLKAVVYEDEEESLQNSRLTYSDLCLQISESKFRLCLLRTLAVLFELMHSYHEIMEFQLDRQDAAGQTSNKNNDDVSCSLGGAGEVDADVRIRSISFSSSGDEIHGSSSREESETASSLVETSNSTALPCTDSHDPDYDARKEDNAASSIESPWYHLRKEATEFVSQTLQRGRKNLWHLTTSRVSVLLSADAACTTSIHQFLKNYEDLSVFILAGEAFCGIEAVEFRQKLKVVCENYFIAFHRQNIHALKMVLERETWLKLPPDTVQMISFSGLVGDGAPLISMSNHKSINPSATDTDKSVNLVHSHNSSRKSGFSCWIQNGNPFLQKLSSPREGHCSSQSNGSPYGEHDGNSKRNFYGDKVLPGKNDSTQMNGANSISDDENEDLLADFIDEDSQLPSRSSKPNHPRRKSLHCNDEENTAQTGSSLSLLRSMDKYARLMQKLEVVNVEFFKGICQLFEIFFNFVFETFGQHNTVFNGKGSTDSLNYRLRTASSKITQDCDQWIKPPSSSPTSAFVHSEVTPASPPSTNLGNSAPTSLGLKERCVAVDTISLVARILNRSKAHLQSMLLQSKATVLEDFYQHLVDVVPDLAEHIHRTTARQLLHINGYVERVANCRWDVKELGLEHNGYVDLLLGEFKHYKTRLAHGGIRQEIQDLLLEYGLEIVAETLVEGLSRVKRCSDEGRALMSLDLQVLINGLHHFVSMNVKPKLQMVETFIKAYYLPETEFVHWARAHPEYTKSQIIGLIHLVATMKSWKRKTRLEVLEKIE 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00389 936 PANTHER UNCHARACTERIZED 1 936 IPR040047 GO:0032456|GO:0042147|GO:1990745
Accr13g00389 936 Pfam Protein of unknown function C-terminus (DUF2451) 706 936 IPR019514 -
Accr13g00389 936 MobiDBLite consensus disorder prediction 497 547 - -
Accr13g00389 936 MobiDBLite consensus disorder prediction 497 517 - -
Accr13g00389 936 MobiDBLite consensus disorder prediction 677 700 - -
Accr13g00389 936 MobiDBLite consensus disorder prediction 279 299 - -
Accr13g00389 936 MobiDBLite consensus disorder prediction 561 593 - -
Accr13g00389 936 MobiDBLite consensus disorder prediction 267 313 - -
Accr13g00389 936 Pfam Vacuolar-sorting protein 54, of GARP complex 1 225 IPR019515 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00389 Accr-Chr13 3875270 3887428 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00389 K23288 - gmx:100803274 1453.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00389 13 3875270 3887428 Accr13g00389 13 3875270 3887428 ECH