Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00387 ATGCAAAACCTCAGCTTCCTTGCTGTCCCTCTTCTGTTATTTGGTCTCCTTCTTCATGGAGGAACTGTCATAGCTTCTGGGAAAAAAGATGGATCAGAGGAATGGGGATATGTTGAAGTCAGACCCAAAGCCCACATGTTCTGGTGGCTATACAAAAGTCCCTACAGAGTTGAAGATCCCTCCAAGCCATGGCCTACCATTCTTTGGTTGCAGGGAGGACCTGGTGCTTCAGGAGTTGGGATTGGGAATTTTGAGGAGGTTGGGCCTTTAGATACCGATTTGAAGCCAAGGAACTCCACATGGCTTAGAAAAGCAGATCTCTTATTTGTGGACAACCCAGTTGGGACAGGGTTCAGCTATGTGGAAAATAAAAATCTCTTAGTAAAAACAGACGAAGAAGCAGCCACTGACTTGACGACATTGTTGATTAATGTATATAATAAAAGAGCGAGCCTCCAAAAGAGTCCTCTGTTCATGGTAGCAGAGTCATATGGTGGAAAATATGCTGTCACTACTGGTTTGTCTGTTCTTAAAGCAATTGAAGCTGGAAAATTGAAGCTCAAACTTGGAGGTGTGGCATTAGGGGACAGTTGGATCTCCCCTGAAGATTATGTGTTCTCATGGGGCCCTGTTCTTAAAGACGTCTCTAGACTTGATGACAATGGGCTGCAAAAATCGAACAAATTAGCCCATAAGATCAAGAAATTAATTGAGAAGGGCCAAATGGTTCAAGCAACCAGATCATGGGGCAAACTTCAGAATGTCATTTCAAAAAACAGCAACAATGTGGACTTTTACAATTTTTTGCGGGATTCCGGAAGCAATGCTACAACTTCATCAACAATGGTGAATCTGGGGTCAAACAGAGAAAGATCACTGAAACGATACTCCAATTATCTAACTTCAAAGAGGTCATCTTCTACTAGTGGTACTGGAAGCCTAAAAGACTTGTTAAATGGTGTCATAAGGAAAAAGTTGAAGATCATCCCAAAAAATGTTAGATGGGAAGATCAGGCCGGTGATGTTTTCAAAAAGCTTAGAGGCGATTTCATGAAACCAAGAATTAATGAGGTTGATGAGTTGCTAGCCAAGGGAGTCAAGGTGACTGTGTACAATGGACAACTTGATCTGATCTGTGCAACCAAGGGAACTGAAGGTTGGCTTAAGAAACTCAAGTGGAAAGGGCTTAAAAGCTTCTTGAAGAAGAACAGAACAGCTCTCTACTGTAAAAATGAACAAGGGACGAAAGGCTTTTTGAAGTCACACAAAAACCTGCACTTTTATTGGATTCTTGGAGCTGGTCATTTTGTACCCACAGATCAGCCTTGTGTAGCATTAAACATGGTGGGTGAGATTACAGAGTCACCGGCAGCAGCTACTACTTAA 1386 0.4221 MQNLSFLAVPLLLFGLLLHGGTVIASGKKDGSEEWGYVEVRPKAHMFWWLYKSPYRVEDPSKPWPTILWLQGGPGASGVGIGNFEEVGPLDTDLKPRNSTWLRKADLLFVDNPVGTGFSYVENKNLLVKTDEEAATDLTTLLINVYNKRASLQKSPLFMVAESYGGKYAVTTGLSVLKAIEAGKLKLKLGGVALGDSWISPEDYVFSWGPVLKDVSRLDDNGLQKSNKLAHKIKKLIEKGQMVQATRSWGKLQNVISKNSNNVDFYNFLRDSGSNATTSSTMVNLGSNRERSLKRYSNYLTSKRSSSTSGTGSLKDLLNGVIRKKLKIIPKNVRWEDQAGDVFKKLRGDFMKPRINEVDELLAKGVKVTVYNGQLDLICATKGTEGWLKKLKWKGLKSFLKKNRTALYCKNEQGTKGFLKSHKNLHFYWILGAGHFVPTDQPCVALNMVGEITESPAAATT 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00387 461 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 442 IPR001563 GO:0004185|GO:0006508
Accr13g00387 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 145 170 IPR001563 GO:0004185|GO:0006508
Accr13g00387 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 120 IPR001563 GO:0004185|GO:0006508
Accr13g00387 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 97 109 IPR001563 GO:0004185|GO:0006508
Accr13g00387 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 425 438 IPR001563 GO:0004185|GO:0006508
Accr13g00387 461 ProSitePatterns Serine carboxypeptidases, serine active site. 159 166 IPR018202 GO:0004185
Accr13g00387 461 SUPERFAMILY alpha/beta-Hydrolases 32 454 IPR029058 -
Accr13g00387 461 FunFam Carboxypeptidase 18 457 - -
Accr13g00387 461 Pfam Serine carboxypeptidase 30 452 IPR001563 GO:0004185|GO:0006508
Accr13g00387 461 Gene3D alpha/beta hydrolase 18 459 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00387 Accr-Chr13 3870647 3873948 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00387 K09646 - qsa:O6P43_028451 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00387 13 3870647 3873948 Accr13g00387 13 3870647 3873948 ECH