Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00385 ATGGCTCCAAAGCGTGCTAAGAACATCGTGGTCAAATCCACTAGAAAAGTAGTCGTGCAAGAAAGCACAGTTCAAGTCTCTGCCCTTAAAAGATCAAGGAGATCAAGCAAAGACATCGAATCAGAGGAAGAAGCAAACAATTTAACCGCGGACAATGTGAGAACCATTCCTGTCCAAGAAGCAACAACTCCTCAGCAGAAAACAGAGCAAGAAAAGCCAATGAAGGAAGGAACTATAGAGCAAGAAAAGCCAATGAAGGAGGGAACTACAGAGCAAGAAAAGCCAATGAAGGAAGGAACAACAGAGCAAGAAAAGCCAATGAAGGAGGGAACAACAGAGCAAGAAAAGCCAATGAAGGAGGGAACAACAGAGCAAGAAAAGCCAATGAAGGAGGGAACAACAGAGCAAGAAAAGCCAATGAAGGAAGGAACTAAAGGGAGGAAAAGGAAGAGAAAGAAGGTGGGAGAAGGGGGAGAAGGGTACAGGAGGTATGTGTACAAAGTACTGAAGCAAGTTCACCCAGAAATGGGGATTTCATTTCAGGCCATGACCATTCTCAACAATCTCATGACTGATATGTTTGAGAGGCTCGCCGATGAAGCTACCAGGCTCAAGACTTACACAGGTCACGCAACATTGTCTTCCAGGGAGATCCAAGGGGCTGTGAAGCTGCTTCTTCCTGGAGAGCTTGGCAAGCATGCCATTGCTGAGGGTGCCAAAGCTGTCTCCAATTATATGTCCCACGAATAA 750 0.4573 MAPKRAKNIVVKSTRKVVVQESTVQVSALKRSRRSSKDIESEEEANNLTADNVRTIPVQEATTPQQKTEQEKPMKEGTIEQEKPMKEGTTEQEKPMKEGTTEQEKPMKEGTTEQEKPMKEGTTEQEKPMKEGTTEQEKPMKEGTKGRKRKRKKVGEGGEGYRRYVYKVLKQVHPEMGISFQAMTILNNLMTDMFERLADEATRLKTYTGHATLSSREIQGAVKLLLPGELGKHAIAEGAKAVSNYMSHE 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00385 249 PANTHER HISTONE H2B 127 247 IPR000558 GO:0000786|GO:0003677|GO:0030527
Accr13g00385 249 SUPERFAMILY Histone-fold 138 248 IPR009072 GO:0046982
Accr13g00385 249 FunFam Histone H2B 62 248 - -
Accr13g00385 249 MobiDBLite consensus disorder prediction 69 143 - -
Accr13g00385 249 MobiDBLite consensus disorder prediction 46 68 - -
Accr13g00385 249 PRINTS Histone H2B signature 219 232 IPR000558 GO:0000786|GO:0003677|GO:0030527
Accr13g00385 249 PRINTS Histone H2B signature 202 219 IPR000558 GO:0000786|GO:0003677|GO:0030527
Accr13g00385 249 PRINTS Histone H2B signature 161 179 IPR000558 GO:0000786|GO:0003677|GO:0030527
Accr13g00385 249 PRINTS Histone H2B signature 180 200 IPR000558 GO:0000786|GO:0003677|GO:0030527
Accr13g00385 249 PRINTS Histone H2B signature 232 245 IPR000558 GO:0000786|GO:0003677|GO:0030527
Accr13g00385 249 MobiDBLite consensus disorder prediction 21 156 - -
Accr13g00385 249 Pfam Core histone H2A/H2B/H3/H4 107 224 IPR007125 GO:0003677
Accr13g00385 249 Gene3D Histone, subunit A 115 249 IPR009072 GO:0046982
Accr13g00385 249 SMART h2b3 147 247 IPR000558 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00385 Accr-Chr13 3850352 3851101 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00385 K11252 - gmx:100786873 191.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00385 13 3850352 3851101 Accr13g00385 13 3850352 3851101 ECH