Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00366 ATGGCTCCTTTCTTCTCTTTTCTCCTACTTCCTCTCATAATTTATTCAAGTAGTGCTCAGGGTCCACCTTCACCAGATTACTTCCCAGGTTCCCAAATTAGCACTCTTAGCTTTGATCAAGGATTCAGAAATCTCTGGGGTCCTCAGCACCAGAGACTAGACCAGGGTTCATTAACAGTCTGGCTTGACTCTGACTCAGGGAGTGGATTCAAGTCACTGCAGTCTTACCGATCTGGTTACTTTGGTGCTGCAATTAAGCTTCAGCCAGGTTATACAGCAGGAGTCATTACATCATTCTATTTATCCAACAACCAAGACCACCCAGGAAACCATGATGAAATTGATCTCGAGTTCCTTGGCACTACACCAGATAAGCCCTATGTGTTACAGACAAACGTATATATCAGAGGCAGTGGAGATGGAAATATCATAGGCAGAGAAATGAGGTTTCATCTTTGGTTCGACCCAACAGAAGACTTTCACAACTACGCTATTCTGTGGAAACCCAGTGAGATCATATTCCTAGTTGATGATATCCCCATAAGGAAGTATCCTAGGAAGAGTGATGCCACATACCCTACAAGACCAATGTATGTGTACGGATCAATATGGGATGCTTCGTCCTGGGCTACAGAGGAAGGAAAATACAAAGCTGATTATAAATACCAACCCTTCGTTGGTAGGTACAAAAACTTCAAGCTCAAAGGTTGCACCACTAATAGCCCTGCCTCGTGCCAACCACCTTCTGCTTCACCTTCTGGCCATGCCAGTCTCACACCTCAGCAATATGCCACCATGCAATGGGTCCAAAACAACTATTTGGTCTATGACTATTGCCATGACACTAAGAGAGATCACACTGTCACTCCAGAGTGCTAG 879 0.4448 MAPFFSFLLLPLIIYSSSAQGPPSPDYFPGSQISTLSFDQGFRNLWGPQHQRLDQGSLTVWLDSDSGSGFKSLQSYRSGYFGAAIKLQPGYTAGVITSFYLSNNQDHPGNHDEIDLEFLGTTPDKPYVLQTNVYIRGSGDGNIIGREMRFHLWFDPTEDFHNYAILWKPSEIIFLVDDIPIRKYPRKSDATYPTRPMYVYGSIWDASSWATEEGKYKADYKYQPFVGRYKNFKLKGCTTNSPASCQPPSASPSGHASLTPQQYATMQWVQNNYLVYDYCHDTKRDHTVTPEC 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00366 292 FunFam Xyloglucan endotransglucosylase/hydrolase 26 292 - -
Accr13g00366 292 PIRSF EndGlu_transf 20 292 IPR016455 GO:0010411|GO:0016762|GO:0042546
Accr13g00366 292 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 256 292 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Accr13g00366 292 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 17 229 IPR000757 GO:0004553|GO:0005975
Accr13g00366 292 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 35 292 IPR044791 GO:0004553
Accr13g00366 292 SUPERFAMILY Concanavalin A-like lectins/glucanases 37 292 IPR013320 -
Accr13g00366 292 Pfam Glycosyl hydrolases family 16 39 221 IPR000757 GO:0004553|GO:0005975
Accr13g00366 292 Gene3D - 18 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00366 Accr-Chr13 3677178 3678595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00366 1 292 Glycoside Hydrolase AT3G44990 65.870 1.35e-141 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00366 K08235 - gmx:100776165 528.48