Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00346 ATGAGCAATTCATACCCTGAAGATTACGAACAAGTAATTGTTGAAGGATTTGAAGTTCCGAAGTCTCCCGATTCCAGTTATAGCAACGAGTATCCTGGAAATGAAGATGACGCACATGATCCGCCCGCAATTCCGCCGCAGTTGCAGCATACAGTGCTCCATTATCCAGCTAGTAGAAGCAATTCTGAGACTCTTCCACTGCCTCATAACGTAAATCTCAATCATCTTTATATTGAGAACAGAGAGGCTCCAAAATCTGTGGTGGCATTAGGAATTACTCATCGCTTCCGATCAAAATATGTTACTGTTGTGCTTTACAAACCAGTCCAAAGAGGCAGTAGTACAAGCATGTAA 354 0.4237 MSNSYPEDYEQVIVEGFEVPKSPDSSYSNEYPGNEDDAHDPPAIPPQLQHTVLHYPASRSNSETLPLPHNVNLNHLYIENREAPKSVVALGITHRFRSKYVTVVLYKPVQRGSSTSM 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00346 117 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 39 108 IPR006828 GO:0005515
Accr13g00346 117 MobiDBLite consensus disorder prediction 1 47 - -
Accr13g00346 117 SUPERFAMILY AMPKBI-like 14 109 IPR037256 -
Accr13g00346 117 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 4 111 IPR043554 -
Accr13g00346 117 Gene3D - 13 109 - -
Accr13g00346 117 SMART AMPKBI_2 20 109 IPR006828 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00346 Accr-Chr13 3501393 3501838 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00346 - - pcin:129298062 193.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00346 13 3501393 3501838 Accr13g00346 13 3501393 3501838 ECH