Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00342 ATGTCTAGTTTCACGGGCGTCTTCAAGGACGAAATAAAAAAGAATCTGGGTTTCTGCATTGTTGATGTAGATGCTGATTGGGATGGGGCATTTAATTTCACAAATGATCTGACATTTTTGACCTCATGTTCCCAAACATTAAAAGGAGATATTTCACAGCGCATATGCACAGCAGCAGAAGTTAAGTTATATGCCAGTGGTTTTGACATAAAGTCAAAGAGCCAATCTAACAACTTGCAGCCCAATAAGAACTGTAACTTGAGCGTTTGGCTCAATGGATGTGAGCCTGGATGGGGCTGTAGTGCTGCTGAGAAAGTTCAACTTAACAATACTAAGGACATCCCTGTCAGGTCTACTGACTGTCAGCCTTGTTGTCCGGGCTTCTTTTGCCCAAGAGGAATTACTTGCATGATACCTTGCCCTTTGGGTGCTTATTGTCCCCGTGGACAGCTCAATCAAGCTACTGGAATATGTGAACCGTATCATTATCAGCTACCTTCTGGAAAGTCAAACCACAGTTGTGGGGGAGCAGATGCTTGGGCAGACATTTCAAGCAGTTGGGATATTTTCTGTTCAGCTGGATCTTACTGTCCGTCCACCATCCAAAAAAATCCTTGCACTCAGGGACATTATTGCAGGACGGGTTCAACCGATCAAGAAAGTTGTTTCAAATTGGCGAGTTGTAAGCCTCAATCAGCGAATCAAAATATAACTGCATATGGTGTCATGGTTTTTGCTGGCTTGAGCTTCTTGCTTATCATCATTTATAATTGCTCTGATCAAGTTCTTGCAACTCGAGAAAGAAGAATAGCAAAATCAAGAGAAAGGGCTGCTGCAAGTGTAAGAGAAACACAAGCACGTGAAAAATGGAAATCGGCGAAAGATATTGCTAAGAAGCATGCAGTAGGACTGCAAACTTCTTTATCACGTACGTTTTCTCGTAGAAAATCTATGAAGGGAGATCTAAAAGCGTTTGGTTCTAAATCTGCGTCAGAAACTCCCTTACCACATGTGCCATCAGCAAGTGCTGGTACATCAGGAGCATCAAAAGAAAAAAAGGATAAAAACAGCCTCACAAAAATGATCCAGCAAATTGAGGATGACCCTGATAGCCAGGAAGGCTTTAATGTTGAGATAGGAGACAAAAATATCAAAAAACAGGCACCAAAAGGCAAGCAATTGCATACGCAAAGCCAAATTTTTAAGTATGCGTACGGTCAGATTGAAAAAGAAAAGGCTTTACAGGAAGAAAATAAGAACCTGACCTTCTCTGGAGTTATTTCAATGGCTAGTGATATTGAGATCAGGAGGAGGCCTACAATTCAGGTTTCTTTCAAGGATTTGACCCTCACTTTGAATGCCAAAAACAAGCATCTTCTAAGATGTGTGACTGGGGAACTACATCCTGGTCGAGTTTCTGCAGTCATGGGCCCATCTGGGGCAGGTAAAACAACATTTCTTTCTGCTCTAACTGGAAAAGCAACTGGATGTCATACAACTGGCTTAGTTCTTATAAATGGCAAGGTTGAATCTATCCGGTCATACAAAAAGATCATTGGGTTTGTGCCACAAGATGATATTGTGCATGGCAATTTGACAGTCGAAGAGAATCTGTGGTTCAGTGCCAGATGCAGGCTTTCAGCTGATCTACCGAAAGCGGAGAAGGTTCTTGTAGTTGAAAGAGTTATTGAGTCATTAGGTCTGCAAGCAATCCGAGATTCGCTGGTTGGAACGGTGGAGAGGCGTGGAATCTCTGGAGGTCAAAGAAAACGAGTGAATGTAGGACTGGAAATGGTTATGGAACCTTCACTCCTGATTTTAGATGAACCGACATCTGGTTTAGATAGTTCATCTTCTCAGTTATTGCTTAGAGCACTTAGACGAGAGGCTTTAGAGGGTGTAAATATATGCATGGTCCTTCACCAGCCAAGTTACACACTGTTCAGGATGTTTGATGATTTTATACTACTCGCTAAAGGTGGTCTTATAGTGTATCATGGACCAGTGAAGAAAGTTGAAGAGTATTTTTCAAGCTTGGGGATTGTTGTTCCTGACCGTGTTAATCCTCCAGATTATTACATAGATATTTTAGAAGGGATAGTAAAACCAAGCTCAAGCACAGCAGTAAACTATAAACAACTACCTGTTAGATGGATGCTTCATAATGGGTATCCTGTTCCTTTGGACCTGCTTCAGGGTGTTGAAGGAATGGAAGGCACAAGTGGTGAAAGTTCCGCACATGGGGCAGCTACTCCAGAAGCAGAAACCCAAGATCCGTCTTTAGCCGGGGAAATTTGGCAAGATGTAAAAGTCCATGTTGAGAAGAAGAAAGACTATCTTCGATCTACTTTCCTTTCTTCAAATGATTTATCTAATCGGGTAACCCCTGGAGTCTTCCAACAATACAGATACTTTCTAGGAAGAAGTGGTAAGCAGCGGCTACGAGAAGCTAGAACACAGGCTGTAGATTTTCTAATTTTGTTATTAGCTGGAATATGCTTAGGAACACTTGCCAAAGTGAGTGATGAATCGTTTGGAGCAACTGGTTACACATATACCGTCATAGCAGTATCCCTCCTGTGCAAGATTGCGGCTTTGAGAACATTTGCACTGGATAAGTTGCACTACTGGAGAGAGAGTGCATCTGGCATGAGTGGCCTGGCTTACTTTCTTGCAAAGGATACAGTTGATCATTTTAATACACTCATAAAGCCTGTGGTCTATCTCTCAATGTTCTATTTCTTCAACAACCCCAGATCCTCGGTTGTAGATAACTACTTTGTTTTGCTGTGCTTGGTGTACTGTGTCACTGGCATAGCTTATATATTGGCGATCGCACTTGAACCTGGTCCTGCCCAATTGTGGGCAGTGTTACTTCCAGTAGTTTTGACTCTTATAGCAACCAGTGATAGTGTAGCTGATAACTCATTTTTTAGCAATGTAGCTAACGTTTGCTATGCAAAGTGGGCTCTTGAAGCATTTGTGATATCAAACGCTAAAAGATATGCTGGTGTTTGGTTAATAACCCGATGTGGTGCACTAAATATGCGAGGCTATGATCTCAACAACTGGTATCAATGTCTTGTGTTTCTAGTGGTAACCGGGGTACTTAGTCGCATTGTGGCATTCTTTTGTATGATGACTCTACAGAAGAAATAA 3159 0.4188 MSSFTGVFKDEIKKNLGFCIVDVDADWDGAFNFTNDLTFLTSCSQTLKGDISQRICTAAEVKLYASGFDIKSKSQSNNLQPNKNCNLSVWLNGCEPGWGCSAAEKVQLNNTKDIPVRSTDCQPCCPGFFCPRGITCMIPCPLGAYCPRGQLNQATGICEPYHYQLPSGKSNHSCGGADAWADISSSWDIFCSAGSYCPSTIQKNPCTQGHYCRTGSTDQESCFKLASCKPQSANQNITAYGVMVFAGLSFLLIIIYNCSDQVLATRERRIAKSRERAAASVRETQAREKWKSAKDIAKKHAVGLQTSLSRTFSRRKSMKGDLKAFGSKSASETPLPHVPSASAGTSGASKEKKDKNSLTKMIQQIEDDPDSQEGFNVEIGDKNIKKQAPKGKQLHTQSQIFKYAYGQIEKEKALQEENKNLTFSGVISMASDIEIRRRPTIQVSFKDLTLTLNAKNKHLLRCVTGELHPGRVSAVMGPSGAGKTTFLSALTGKATGCHTTGLVLINGKVESIRSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLSADLPKAEKVLVVERVIESLGLQAIRDSLVGTVERRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPSYTLFRMFDDFILLAKGGLIVYHGPVKKVEEYFSSLGIVVPDRVNPPDYYIDILEGIVKPSSSTAVNYKQLPVRWMLHNGYPVPLDLLQGVEGMEGTSGESSAHGAATPEAETQDPSLAGEIWQDVKVHVEKKKDYLRSTFLSSNDLSNRVTPGVFQQYRYFLGRSGKQRLREARTQAVDFLILLLAGICLGTLAKVSDESFGATGYTYTVIAVSLLCKIAALRTFALDKLHYWRESASGMSGLAYFLAKDTVDHFNTLIKPVVYLSMFYFFNNPRSSVVDNYFVLLCLVYCVTGIAYILAIALEPGPAQLWAVLLPVVLTLIATSDSVADNSFFSNVANVCYAKWALEAFVISNAKRYAGVWLITRCGALNMRGYDLNNWYQCLVFLVVTGVLSRIVAFFCMMTLQKK 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00342 1052 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 443 685 IPR003439 GO:0005524
Accr13g00342 1052 CDD ABCG_EPDR 441 667 - -
Accr13g00342 1052 ProSitePatterns ABC transporters family signature. 584 598 IPR017871 GO:0005524|GO:0016887
Accr13g00342 1052 Gene3D - 441 679 IPR027417 -
Accr13g00342 1052 Pfam ABC transporter 463 612 IPR003439 GO:0005524
Accr13g00342 1052 SMART AAA_5 469 670 IPR003593 GO:0016887
Accr13g00342 1052 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 443 681 IPR027417 -
Accr13g00342 1052 MobiDBLite consensus disorder prediction 737 757 - -
Accr13g00342 1052 MobiDBLite consensus disorder prediction 333 347 - -
Accr13g00342 1052 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 193 1040 - -
Accr13g00342 1052 Pfam ABC-2 type transporter 641 1052 IPR043926 GO:0140359
Accr13g00342 1052 FunFam ABC transporter G family member 24 437 679 - -
Accr13g00342 1052 Coils Coil 348 368 - -
Accr13g00342 1052 MobiDBLite consensus disorder prediction 323 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00342 Accr-Chr13 3433124 3439139 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00342 470 673 Calmodulin-binding Proteins AT2G36910 27.803 1.07e-10 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00342 - - gmx:100794093 1677.92