Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00322 ATGGCCGGGAAAGCTGCAACGACTTCGACGACCTACTCGCCGTCTCCGACCACCCTGAAAACCAAGGCTCCTATTTTCAATGAAGATTGGGTCCGACCCGATGGCCGTGGCTTTCACCAGTGCAGGCCTGCCTTTTTCAGAACTGGTGCTGTGAATGCTGCTTCTGGATCGGCTTATGCAGAGTTTGGAAACACCAAGGTCATTGTATCTGTGTTCGGGCCAAGAGAGAGTAAGAAGGCCATGATGTATAGCGACATAGGGCGTCTAAATTGCAATGTAAGCTTTACAACATTTTCAACTCCACTTCGTGGCCAGGGACTGGACAACAAAGAATACACTGCAATGCTTCATAAGGCTTTGGAGGGTTCAATAATGTTGGAAACTTTTCCCAAGACCACTGTAGATGTTTTTGCGTTGGTACTGGAATCTGGTGGCAGTGATCTCCCAGTTGTCATATCATGTGCTAGCCTTGCCCTAGCAGATGCTGGAATAATGATGTATGACCTTATTGCCTCAGTTTCTGTGTCGTGTCTCGGTAAGAACCTGGTTATTGATCCTATTTTGGAAGAGGAAAGCAGTCAAGATGGAAGCTTAATGATAACTTGCATGCCTTCTCGTTATGAAATCACCCAGCTCACTGTTACTGGGGATTGGTCCACCCCAAAAATTAACGAGGGAATGCAGCTATGCTTAGATGCTTGTGCAAAGCTTGCAAAGATCATGAGGTCATGTCTGAAAGAAGCTGCTTTAGGTTCACAAGAATAG 765 0.4627 MAGKAATTSTTYSPSPTTLKTKAPIFNEDWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCNVSFTTFSTPLRGQGLDNKEYTAMLHKALEGSIMLETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLIASVSVSCLGKNLVIDPILEEESSQDGSLMITCMPSRYEITQLTVTGDWSTPKINEGMQLCLDACAKLAKIMRSCLKEAALGSQE 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00322 254 PANTHER EXOSOME COMPLEX COMPONENT 32 245 - -
Accr13g00322 254 SUPERFAMILY Ribosomal protein S5 domain 2-like 27 192 IPR020568 -
Accr13g00322 254 SUPERFAMILY Ribonuclease PH domain 2-like 166 249 IPR036345 -
Accr13g00322 254 Pfam 3' exoribonuclease family, domain 2 168 228 IPR015847 -
Accr13g00322 254 Gene3D - 19 251 IPR027408 -
Accr13g00322 254 CDD RNase_PH_MTR3 41 247 - -
Accr13g00322 254 FunFam Exosome complex component RRP41-like 11 250 - -
Accr13g00322 254 Pfam 3' exoribonuclease family, domain 1 40 164 IPR001247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00322 Accr-Chr13 3104135 3107881 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00322 K12587 - gmx:100819105 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00322 13 3104135 3107881 Accr13g00322 13 3104135 3107881 ECH