Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00318 ATGCAAAATGGGGTTCGAACGGAATTCAAGCTGAGAAGTAGAGATTACTTGGAAGGAATGGTCAGTGACTATGTTGGAGGGAAGACCAAAATGAAGGCTCAAAGAAGTGGTTCTGCTAAGCTTGTGACTGCTCTAACATGTCTTCAGCTTTTCTTTGCAGTTTATGCAACTTTCTTGCTGTACTATATGAGCCCCACTATTGATTTAAGATCAAAACCCGATTTTACTTGGGCTACAAAAATCGCAAATCAATGGAGGAACATGATGATCACACCCCACATATTAGGTCGATACCGTGAAGCTTCTTCTCTCATCAGGGAGGATTTTCAGGTGCAACAACCAATTACTCCATCTGAAGTGTGTGAGTATGAGAAGATCGATTTCTTGCAGAAGAAGTCAAATGATGTGCAGATGATTAAGTTGAAGACAGAGCTCTACAATGAGGTTTTAGAATTTCAGAGCACAACCATTGGCTCTGAGTCTCTTTCTGAGCTAATGGCTATGAAATCCAAATGGGATTTGAGAGGTCCAAACAAACCAAAAATCACAGTTATTCTAAACCATTTCAAGAGAAAGACACTTTGTTCTCAGATTGATTCTCTGCTTCAACAGACCCTCCCATTCCACCATGTCTGGGTTCTCTCATTTGGGAGCCCAAATGAGTTATCACTGAAGAGGATTGTGGAAAGCTACAATGATTCAAGAATCAGCTTCATAAGCTCGAGTTACGATTTCAAGTACTATGGAAGGTTCCAGATGGCTCTTCAGACTGAGGCTGATCTTGTTTATATAGTTGATGATGACATGATTCCTGGGAGGAAGATGTTGCAGATATTGGCACATGTGGCTGGAACAGAGAAGTATAAGAACTCTGTTTTGGGAAGTATAGGAAGGATATTGCCTTTCAGACAGAAGGATTTTACATTCCCAAGTTACAGAAAATTCAGGTCTAAGGAAGCTGGACTTTATTTGCCTGATCCTGCTTATAATATTACGGTTGATAAAATTGTGCAGGTGGATTTCTTATCTAGTTCATGGTTCTTATCGGCTGAGCATGTCAAAACTCTGTTCGCTGAGACACCTTTTACCTTTTCAACTGGGGAAGATTTGCATCTCAGCTATCAACTTCAGAAATATAAAAATGCGGGCTCGTTTGTTCTGCCGGTTGACCCAAATGACAAAGAAACTTGGGGTGATAGTGAGCACAGGCTAGCTTATGTCTCAGAAACCACTGTAATCTTCAAGGATATTGTTCAAGTTCGAGACGATCAATGGTGGAAAACGCTTTCCAGTGGTTATGTGACCCAATGGGCTGCAATGTACCCTCAGAAAATTGATGCACTCTTTTATGCTCACTCAATTGATGAAGTCAAAGCACTTGCACCACTTCTTGAGAAGTTCAGGTCCACAGTTGGTAAAAAAGCTTACATAGCTGTGTCAGGAAGCAACTTCTGTCCTTGTGAAGATGCTGCATCTGCTCTAAATTGGCCTAAGTTGGTATGCAAAGAGAGAAGGTTTAAGATTTTTGACTTGGCGATAGGATCACTTTCTGGTGTATCAAACTCCGAGGTTCCAGTTATAAATGCGGTGTATTCTAGCATGAAGGGTTTGATTAAAATTCATAATCCTAGTGTTGTTATCACTGTGTCAGACATTGATCCTAATGTGAAGAAGGCTTTGAAGATGGCTTCAGAAGCTGGTTCCAATGCTACAACTCTAGTTCTTTTACCAAGAGCTTCCATTTCAAAAGTTCTCTGGATGGCTGATCTAAGAACAACAGCATTGCCAAATTGGAACAAAATGCGGATTTCTGTCAACATCATTACCCAAACCCGAGCTAATTCACTAACAAGGCTTCTGAAATCTCTGTCCAATGCTTACTATGTTGGAGATGAAGTTCCTATAACATTCAACATGGACAGTAAAGTAGACGAAGCAACTATAAAACTCGTGAGCTCGTTCGAGTGGCCTCATGGACCGAAAACCTTGAGAAGGAGAATCATCCAAGGAGGGCTCATTAGAGCAGTGAGTGAGAGCTGGTACCCTTCTTCTGATGATGATTTTGGTCTTCTTCTCGAAGATGACATAGAAGTTTCTCCTTACTATTACCTATGGATCAAATATGCACTCTTAGCTTACCACTATGATCCTCAAGTCTCTCTCCCTGAGCTCTCCTCAATCTCTCTTTACACCCCAAGACTTGTTGAAGTTGTCAAAGAAAGGCCTAGATGGAATGCCACTGAGTTCTTCAAAACAATCCATCCAAACACCCCGTACTTACACCAGTTACCATGTAGTTGGGGCGCAGTTTTCTTCCCTAAACACTGGAGAGAGTTTTATGTGTATATGAACATGAGGTTCACTGAGAATGTCAAAGAAAACCCGGTTCAAATCCCAAAGTCTAGAACTAATGGGTGGCAAGCTTCATGGAAGAAGTTCCTCATAGACATGATGTACCTTAGAGGGTATGTTAGTCTCTATCCGAATTTCCCAAACCAAGCTAGCTTCTCAACCAACCATATGGAACCAGGAGCTCATATCAGTGCAAAAGATAATGTGGTTAGGCATGACAAGCGTGACTTTGAAGTTCCGTTGTTGAATCAAGACTTTAGAACTTTTCTGCCAGGAATGAAGTTGCCTCCAGCTTCAAAGTTGCCATCTTTGAACCTCTTTAATCAACCTGTTTCTCTAAAGGGCTTGAAGTCTGCTGGGGCTAAGTTAGGTCAGGATGTGTTAAGATGTAACAATGTCACTGAGATTGTTTCTGTGGATCATAATACAGGTCTGCCACAAAGCTGCATGAAGTTCTGA 2811 0.413 MQNGVRTEFKLRSRDYLEGMVSDYVGGKTKMKAQRSGSAKLVTALTCLQLFFAVYATFLLYYMSPTIDLRSKPDFTWATKIANQWRNMMITPHILGRYREASSLIREDFQVQQPITPSEVCEYEKIDFLQKKSNDVQMIKLKTELYNEVLEFQSTTIGSESLSELMAMKSKWDLRGPNKPKITVILNHFKRKTLCSQIDSLLQQTLPFHHVWVLSFGSPNELSLKRIVESYNDSRISFISSSYDFKYYGRFQMALQTEADLVYIVDDDMIPGRKMLQILAHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYNITVDKIVQVDFLSSSWFLSAEHVKTLFAETPFTFSTGEDLHLSYQLQKYKNAGSFVLPVDPNDKETWGDSEHRLAYVSETTVIFKDIVQVRDDQWWKTLSSGYVTQWAAMYPQKIDALFYAHSIDEVKALAPLLEKFRSTVGKKAYIAVSGSNFCPCEDAASALNWPKLVCKERRFKIFDLAIGSLSGVSNSEVPVINAVYSSMKGLIKIHNPSVVITVSDIDPNVKKALKMASEAGSNATTLVLLPRASISKVLWMADLRTTALPNWNKMRISVNIITQTRANSLTRLLKSLSNAYYVGDEVPITFNMDSKVDEATIKLVSSFEWPHGPKTLRRRIIQGGLIRAVSESWYPSSDDDFGLLLEDDIEVSPYYYLWIKYALLAYHYDPQVSLPELSSISLYTPRLVEVVKERPRWNATEFFKTIHPNTPYLHQLPCSWGAVFFPKHWREFYVYMNMRFTENVKENPVQIPKSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPNQASFSTNHMEPGAHISAKDNVVRHDKRDFEVPLLNQDFRTFLPGMKLPPASKLPSLNLFNQPVSLKGLKSAGAKLGQDVLRCNNVTEIVSVDHNTGLPQSCMKF 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00318 936 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 168 389 IPR029044 -
Accr13g00318 936 SUPERFAMILY Nucleotide-diphospho-sugar transferases 175 379 IPR029044 -
Accr13g00318 936 SUPERFAMILY Nucleotide-diphospho-sugar transferases 600 789 IPR029044 -
Accr13g00318 936 CDD Glyco_tranf_GTA_type 184 283 - -
Accr13g00318 936 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 602 851 IPR029044 -
Accr13g00318 936 PANTHER OSJNBA0004B13.7 PROTEIN 284 927 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00318 Accr-Chr13 3052136 3055556 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00318 - - jre:108990056 1672.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00318 13 3052136 3055556 Accr13g00318 13 3052136 3055556 ECH