Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00301 ATGCCCTCCGATACCGGTTCTTCAGCCCCCCACCATGACCTTGACCCCGAGCCTCAATCAGTTGAGGAACAATTGGCTTCGGTCACATTGTCTGTCTCCGATGGCCAACCATCGACGCATCAAGAAACTAACGGCGTTGTCCTTGAGTCTGTCAATCAGAACACTCAACTTGTAATGGAGGAACAACTTCAGCACATTTCAGTTCCTGCTGGTGAAATTGATGAGGTTAGGGAATCTGCCGACCGCGGAGTCGTATGGGGGAGGACCGCTTCGGAGGTCGACATGGATGGTTTGTCCAGCCCTAGCAGTAGTGGGTATGCTGGTGAAAGGGGGAGTAGCAGCGAGACTAGCGGCTCGGTAATTGGTGACGTCGTTGAACAGGATGAAATTGAGGAGACGAGGAATGATGTTATAGTCGACGAAGTTTCTGAATCCCGCACGCCCTGGCTTCCTGCGAAACGACATGTAGATGAGGATGATGCTTCCATATCGTGGAGGAAAAGGAAGAAGCATTTTTTTATTCTTAGTAATTCTGGCAAACCAATATATTCGAGATATGGGGATGAACACAAGCTTGCAGGATTTTCGGCTACTTTGCAAGCAATAATTTCCTTTGTAGAGGACGGGGGTGACTGTGTCAAATTGTTGAGAGCCGGAAAGCATCAGGTGGTTTTTCTTGTGAAAGGACCAATTTACTTGGTTTGCATCAGCTGCACAGAAGAACCTTATGAGTCATTAAAAGGGCAATTGGAGCTTATTTATGATCAGATGCTAGTTATCTTAACAAAATCAGTGAACAGATGTTTTGAGAAGAATCCAAAGTTTGACATGACACCACTGCTTGGAGGAACAGATGTTGTCTTCTCTTCTCTTATACATTCTTTTAGCTGGAATCCAGCTACATTTCTTCATGCCTATACTTGTCTCCCTCTTGCATATGCCACAAGGCAAGCTGCCGGTGCTATCTTGCAAGATGTTGCTGATTCAGGTGTTTTGTTTGCAATACTAATGAGCAGGCACAAGGTAGTCAGTCTTGTTGGTGCTCAGAAAGCTTCTCTTCATCCCGATGATATGCTGCTATTGGCCAACTTTGTAATGTCCTCTGAATCCTTTAGGACATCAGAATCATTTTCTCCAGTTTGCTTGCCAAGATATAATCCTTTTGCATTTTTGTATGCCTATATCCATTATTTTGATGCTGACACATACCTGATGTTGCTAACCACTAATTCAGATGCCTTTTATCATCTCAAGGATTGTAGGATTCGTATCGAAGCGGTCCTTTTCAAATCAAATGTCCTTAGTGAAGTTCAGAGGTCCTTGATAGATGGTGGTATGCACATTGAGGATCTGCTTGTTGACCCTTTAACCCGTTCTGAATCATCTTCTCATCTAGGGCAGCACAAGCCTCCAACAGAGTCTCTTGAAAGGTTGAAGGAACCTTATCTTGGTGTTGGTGGTCCTGCTGGGTTGTGGCATTTCATATATCGCAGTATATATCTAGATCAATATGTATCTTCAGAGTTTTCGTCTCCAATTAACACTCCACGGCAGCAGAAAAGACTGTATAGGGCTTACCAGAAACTTTTTGCTTCTATGCATGATAAAGGAGTGGGGCCACACAAAACTCAGTTTAGAAGAGATGAAAACTATGTTCTTCTCTGTTGGGTGACACAGGATTTTGAACTTTATGCAGCCTTTGATCCCCTTGCAGACAAGGCCTCAGCAATAAAGGCTTGCAATCGGGTTTGTCAATGGGTGAAAGATGTGGAGAACGAGATATTTTTGCTAGGTTCTAGCCCCTTCTCTTGGTGA 1815 0.4413 MPSDTGSSAPHHDLDPEPQSVEEQLASVTLSVSDGQPSTHQETNGVVLESVNQNTQLVMEEQLQHISVPAGEIDEVRESADRGVVWGRTASEVDMDGLSSPSSSGYAGERGSSSETSGSVIGDVVEQDEIEETRNDVIVDEVSESRTPWLPAKRHVDEDDASISWRKRKKHFFILSNSGKPIYSRYGDEHKLAGFSATLQAIISFVEDGGDCVKLLRAGKHQVVFLVKGPIYLVCISCTEEPYESLKGQLELIYDQMLVILTKSVNRCFEKNPKFDMTPLLGGTDVVFSSLIHSFSWNPATFLHAYTCLPLAYATRQAAGAILQDVADSGVLFAILMSRHKVVSLVGAQKASLHPDDMLLLANFVMSSESFRTSESFSPVCLPRYNPFAFLYAYIHYFDADTYLMLLTTNSDAFYHLKDCRIRIEAVLFKSNVLSEVQRSLIDGGMHIEDLLVDPLTRSESSSHLGQHKPPTESLERLKEPYLGVGGPAGLWHFIYRSIYLDQYVSSEFSSPINTPRQQKRLYRAYQKLFASMHDKGVGPHKTQFRRDENYVLLCWVTQDFELYAAFDPLADKASAIKACNRVCQWVKDVENEIFLLGSSPFSW 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00301 604 PANTHER SAND PROTEIN-RELATED 29 602 IPR004353 GO:0006623
Accr13g00301 604 MobiDBLite consensus disorder prediction 95 121 - -
Accr13g00301 604 MobiDBLite consensus disorder prediction 1 47 - -
Accr13g00301 604 Pfam Third Longin domain of FUZ, MON1 and HPS1 490 590 IPR043970 GO:0016192
Accr13g00301 604 Pfam Second Longin domain of FUZ, MON1 and HPS1 331 421 IPR043971 GO:0016192
Accr13g00301 604 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 403 429 IPR004353 GO:0006623
Accr13g00301 604 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 553 567 IPR004353 GO:0006623
Accr13g00301 604 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 302 323 IPR004353 GO:0006623
Accr13g00301 604 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 170 187 IPR004353 GO:0006623
Accr13g00301 604 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 326 339 IPR004353 GO:0006623
Accr13g00301 604 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 222 236 IPR004353 GO:0006623
Accr13g00301 604 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 569 582 IPR004353 GO:0006623
Accr13g00301 604 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 582 602 IPR004353 GO:0006623
Accr13g00301 604 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 188 208 IPR004353 GO:0006623
Accr13g00301 604 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 350 366 IPR004353 GO:0006623
Accr13g00301 604 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 273 285 IPR004353 GO:0006623
Accr13g00301 604 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 375 398 IPR004353 GO:0006623
Accr13g00301 604 Pfam First Longin domain of FUZ, MON1 and HPS1 170 291 IPR043972 GO:0016192
Accr13g00301 604 MobiDBLite consensus disorder prediction 93 126 - -
Accr13g00301 604 MobiDBLite consensus disorder prediction 22 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00301 Accr-Chr13 2879824 2885821 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00301 K20195 - qsa:O6P43_028373 950.273