Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00295 ATGCTCCGTCGGCGAGTCGTCCTTTTTCTTTCCCTCACTACTCTTCTTCTTTTGTCGTCCTTCTCTCTCACTATATGCAAGGCCGTCGAAAACGACAACGACGACGAAGATCTCAGCTTTCTCGAAGAAGCTGATGATAGCTCTGCCTCCGACCATCATTACCCAGATCTGGATCATTTCGACGATGGTCCCGTCGGCGAAGATGATTTTGAGGACTTCTCAGGCTTTGACGAGTCGGATGCCGATGCGGAGGGATTCAAAGAACCCAAGGTGGATGACAAAGATGTTGTTGTATTGAAGGAGAGTAATTTCAGTGACGTTGTGAAGAAAAATCAGTTTGTGATGGTGGAATTTTACGCGCCCTGGTGTGGTCACTGCCAGGCTTTGGCTCCAGAATATGCTGCGGCCGCCACTGAGTTGAAGGGTGAGAATGTGCTTTTGGCGAAGGTGGATGCCACGGAGGAGAATGAATTAGCCCAGGAGTACGACATTCAGGGATTCCCCACAGTCTATTTCTTCGTCGATGGGGTTCACAAGCCTTACAATGGCCCGAGGAGCAAAGATGCTATAGTAACCTGGATTAAGAAGAAGATAGGACCCGGTGTTTCCAATATAACTACATTGGATGATGCCGAACGCATATTGACCTCTGAAAACAAAGTTGTTTTGGGCTTCCTCAACTCTTTAGCGGGTCCTGAAAGTGAGGAGCTAGCTGCTGCATCTCGACTTGAGGATAATGTCAATTTCTATCAAACTGTTAATCCTGATGTGGCAAAGCTTTTTCATATTGATCCAAATGTCAAACGTCCAGCTTTGGTTCTGCTTAAGAAAGAGGAGGAGAAATTGAACCATTTTGATGGCCAATTTGTAAAATCAGCAATAGCAGAATTTGTGTACTCAAACAAACTCCCTCTGGTCACAGCTTTTACCAGAGAAAGTGCCCCAGCAGTTTTTGAAAACCCAATCAAGAAACAGCTGTTGCTCTTTGTGACTTCAAATGATTCAGAGAAGTTACTCCCAGAATTCCGAGAAGCAGCAAAATTTTTCAAGGGAAAGCTGATCTTTGTACATGTGGAGCTGGATAATGAAGATGTTGGAAAGCCAGTTTCCGAATTCTTTGGCATCAGTGGGAATGCTCCGAAAGTACTTGCATACACCGGAAATGATGATGGGAGGAAATTTGTGCTTGATGGAGAAGTGACTGTTGACAAAATTAAGGCATTTGGGGATGATTTCCTTGAAGACAAGCTAAAACCTTTCTACAAGTCGGATCCAATTCCTGAAAATAACGACAGGGATGTGAAAATCGTGGTTGGGGATAACTTTGACGAGATTGTCTTGGATGAGTCTAAGGATGTTCTCCTTGAGATTTATGCACCGTGGTGTGGTCATTGCCAAGCTCTGGAACCAACATACAATAAGCTTGCTAAACATCTGCGTGGCATTGAGTCTCTTGTCATAGCCAAGATGGACGGAACAACAAATGAGCATCCAAGGGCTAAGACTGATGGATTCCCCACCATCCTCTTCTTCCCAGCTGGAAACAAGAGTTTTGACCCTGTTACCGTTGATACCGATCGTACAGTGGTAGCCTTTTATAAATTCATAAAGAAACATGCATCAATCCCATTCAAGCTCCAGAAACCAACCACAAGCGCCAAATCTTCTGGTTCTGATGATGCCAAGGAGAGTCAGAGTGAGAGTGAGAGTAGCAGTAAGGATGTGAAGGATGAATTGTGA 1740 0.4466 MLRRRVVLFLSLTTLLLLSSFSLTICKAVENDNDDEDLSFLEEADDSSASDHHYPDLDHFDDGPVGEDDFEDFSGFDESDADAEGFKEPKVDDKDVVVLKESNFSDVVKKNQFVMVEFYAPWCGHCQALAPEYAAAATELKGENVLLAKVDATEENELAQEYDIQGFPTVYFFVDGVHKPYNGPRSKDAIVTWIKKKIGPGVSNITTLDDAERILTSENKVVLGFLNSLAGPESEELAAASRLEDNVNFYQTVNPDVAKLFHIDPNVKRPALVLLKKEEEKLNHFDGQFVKSAIAEFVYSNKLPLVTAFTRESAPAVFENPIKKQLLLFVTSNDSEKLLPEFREAAKFFKGKLIFVHVELDNEDVGKPVSEFFGISGNAPKVLAYTGNDDGRKFVLDGEVTVDKIKAFGDDFLEDKLKPFYKSDPIPENNDRDVKIVVGDNFDEIVLDESKDVLLEIYAPWCGHCQALEPTYNKLAKHLRGIESLVIAKMDGTTNEHPRAKTDGFPTILFFPAGNKSFDPVTVDTDRTVVAFYKFIKKHASIPFKLQKPTTSAKSSGSDDAKESQSESESSSKDVKDEL 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00295 579 Gene3D Glutaredoxin 303 428 - -
Accr13g00295 579 FunFam Protein disulfide-isomerase 86 197 - -
Accr13g00295 579 ProSiteProfiles Thioredoxin domain profile. 77 199 IPR013766 -
Accr13g00295 579 MobiDBLite consensus disorder prediction 560 579 - -
Accr13g00295 579 NCBIfam protein disulfide-isomerase domain 99 197 IPR005788 GO:0003756
Accr13g00295 579 CDD PDI_b'_family 323 413 - -
Accr13g00295 579 SUPERFAMILY Thioredoxin-like 301 431 IPR036249 -
Accr13g00295 579 NCBIfam protein disulfide-isomerase 94 579 IPR005792 GO:0003756
Accr13g00295 579 Pfam Thioredoxin-like domain 237 409 - -
Accr13g00295 579 ProSitePatterns Thioredoxin family active site. 454 472 IPR017937 -
Accr13g00295 579 CDD PDI_b_family 202 301 - -
Accr13g00295 579 Gene3D Glutaredoxin 83 198 - -
Accr13g00295 579 ProSitePatterns Thioredoxin family active site. 115 133 IPR017937 -
Accr13g00295 579 Gene3D Glutaredoxin 199 302 - -
Accr13g00295 579 FunFam Protein disulfide-isomerase 303 428 - -
Accr13g00295 579 PRINTS Thioredoxin family signature 122 131 - -
Accr13g00295 579 PRINTS Thioredoxin family signature 163 174 - -
Accr13g00295 579 PRINTS Thioredoxin family signature 114 122 - -
Accr13g00295 579 CDD PDI_a_family 97 194 - -
Accr13g00295 579 CDD PDI_a_PDI_a'_C 434 536 - -
Accr13g00295 579 ProSiteProfiles Thioredoxin domain profile. 420 541 IPR013766 -
Accr13g00295 579 PANTHER PROTEIN DISULFIDE ISOMERASE 15 576 - -
Accr13g00295 579 FunFam protein disulfide-isomerase A2 198 302 - -
Accr13g00295 579 Pfam Thioredoxin 96 196 IPR013766 -
Accr13g00295 579 Pfam Thioredoxin 434 524 IPR013766 -
Accr13g00295 579 Gene3D Glutaredoxin 429 542 - -
Accr13g00295 579 SUPERFAMILY Thioredoxin-like 205 313 IPR036249 -
Accr13g00295 579 FunFam Protein disulfide-isomerase 429 542 - -
Accr13g00295 579 SUPERFAMILY Thioredoxin-like 429 541 IPR036249 -
Accr13g00295 579 MobiDBLite consensus disorder prediction 547 579 - -
Accr13g00295 579 SUPERFAMILY Thioredoxin-like 89 199 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00295 Accr-Chr13 2825520 2829152 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00295 K09580 - qsa:O6P43_000320 882.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03459 1 71147438 71151283 Accr13g00295 13 2825520 2829152 CCT