Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00282 ATGAATTCAAGGGAAGGAGTGAGTGATGGTCGAACTAGAATTGAACCAAATGATTCTCTTCTCCCTGGTCTTATTGATGATGTTGCCCTGAACTGTCTTGCATGGGTTAGTAGATCGGATTATGCTTCACTATCTTGTATAAATAAAAGATACAATAAGCTGATTAAAAGTGGGTATTTATATGGGTTGAGGAAACATTTGGGACTTGTGGAGCATTGGGTTTATTTGGTGTGTGATCCCCGGGGATGGGAAGCATTTGACACCGTGAAAAAGAAATGGATGGCACTACCTAAGATACCATGTGATGAATGCTTCAACCATGCGGACAAGGAGTCCTTGGCTGTGGGCAGTGAACTATTGGTATTTGGTCGGGAATTAATGGATTTTGCTATTTGGAAGTATAGCTTGATTTTTCATGGTTGGGTTAAGTGCCAGGGGATGAATAGGCCGCGCTGTTTGTTTGGATCTGGTAGTCTCGGCTCGATTGCTATTGTTGCAGGTGGAAGTGATAAAAGTGGACATGTTCTAAAATCAGCTGAGCTGTATGACTCTTCGTCTGGTAGATGGGAACAGTTACCAAACATGCACACACCACGTAGATTGTGCTCGGGTTTTTTCTTGGATGGCAAATTCTATGTCATTGGTGGAATGTCCGGTCCTGCAGTTTCTTTGACCTGTGGAGAGGAGTATAATCTTGAGACAAGAAGTTGGCGGAAAATAGAGGATATGTATCCATTTGTTAATGGGGCTGCTCAGGCACCCCCACTTGTGGCAGTTGTGGACAACCAGTTATTTGCTGTGGAGCATCTGACCAACATGGTGAAGAAGTACAACAAGGTGAAGAATGCCTGGGATGAATTGGGAAGGCTTCCAGTCCGGGCTGATTCTTCTAATGGATGGGGGTTGGCTTTCAAGGCTTGTGGGAAGCACCTTCTGGTCGTGGGTGGTCAAAGAGGTCCTGAAGGTGAAGCTGTTGTGCTGAATTCCTGGTGCCCTGCATCCGGGGTAAAAAACGGCACCTTAGATTGGCAGGTTCTTGCTGTGAAGGAGCATGTTGGGGTGTTTGTGTACAATTGTGCTGTTATGGGTTGTTGA 1095 0.453 MNSREGVSDGRTRIEPNDSLLPGLIDDVALNCLAWVSRSDYASLSCINKRYNKLIKSGYLYGLRKHLGLVEHWVYLVCDPRGWEAFDTVKKKWMALPKIPCDECFNHADKESLAVGSELLVFGRELMDFAIWKYSLIFHGWVKCQGMNRPRCLFGSGSLGSIAIVAGGSDKSGHVLKSAELYDSSSGRWEQLPNMHTPRRLCSGFFLDGKFYVIGGMSGPAVSLTCGEEYNLETRSWRKIEDMYPFVNGAAQAPPLVAVVDNQLFAVEHLTNMVKKYNKVKNAWDELGRLPVRADSSNGWGLAFKACGKHLLVVGGQRGPEGEAVVLNSWCPASGVKNGTLDWQVLAVKEHVGVFVYNCAVMGC 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00282 364 SUPERFAMILY Kelch motif 81 321 IPR015915 GO:0005515
Accr13g00282 364 SMART kelc_smart 210 262 IPR006652 GO:0005515
Accr13g00282 364 SMART kelc_smart 162 209 IPR006652 GO:0005515
Accr13g00282 364 FunFam F-box/kelch-repeat protein SKIP11 66 348 - -
Accr13g00282 364 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 16 364 - -
Accr13g00282 364 Pfam Kelch motif 150 195 IPR006652 GO:0005515
Accr13g00282 364 Pfam Kelch motif 198 243 IPR006652 GO:0005515
Accr13g00282 364 CDD F-box_AtAFR-like 20 64 - -
Accr13g00282 364 Gene3D - 72 352 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00282 Accr-Chr13 2755199 2756293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00282 15 241 Miscellaneous Gene Families AT4G33900 25.991 2.52e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00282 - - rcu:8263148 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00282 13 2755199 2756293 Accr13g00282 13 2755199 2756293 ECH