Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00277 ATGAGAACGATACATATACTATTTCTTTTCTCTTGGTTCCTAGGCGTTCTAGCCTACACGTCGTTTTGTGCCAATGTCACGTACGACCACCGTGCATTGGTCATCGACGGCAAGCGCCGTCTCCTTATCTCTGGTTCTATTCATTACCCTCGCAGTACTCCAGAGATGTGGCCGGACCTTATTCAGAAATCCAAAGATGGAGGACTCAATGTGATTGAAACCTACGTCTTCTGGAACAAGCACGAACCAGTCCGAGGCCAGTATAATTTTGAAGGCGGGAACGATCTAGTGAAATTCGTCAAGTTAGTAGGAGCAGCGGGCCTATACGTGCATCTACGGATTGGTCCGTACGTATGCGCTGAATGGAACTATGGTGGTTTCCCTCTCTGGTTGCATTTTATTCCCGGAATTCAGTTCCGTACTGATAATGAACCATTCAAGAGAGAAATGCAGCGATTTACTGCTAAAATTGTGGACTTGATGAAGAAAGAGAATCTCTATGCGTCTCAGGGAGGACCTATTATTTTATCTCAGATTGAAAATGAGTATGGTAATAGTGACATTGAGCCTCGCTATGGTCCTGCTGCTATACCTTACGTCAAGTGGGCAGCTTCAATGGCCATATCCCTCAATACAGGAGTTCCCTGGGTCATGTGCCAGCAAGCAGATGCCCCAGATCCCATTATTAACACTTGCAATGGATTTTACTGTGATCAATTCACACCAAACTCTAACAAGAAACCAAAGTTTTGGACTGAGAATTGGAGTGGATGGTTTCGATCATTTGGTGGTGCAGTTCCCTACAGACCTGTAGAAGATCTTGCATTTGCCGTGGCACGGTTTTTCCAACGTGGTGGAACATTACAAAATTATTATATGTACCATGGTGGGACTAACTTTGACCGAACTTCTGGTGGTCCATTCATTTCTACAAGTTATGACTATGATGCACCAATTGATGAGTATGGAATTATCAGACAGCCTAAGTGGGGACACCTCAAAGATGTGCATAAGGCCATAATGCTTTGTGAAGAAGCATTGCTAGCCACTGATCCTCAAATTAAATCACTTGGTCCGAATCTAGAGGCTGCAGTTTACCAGGCAGGATCTACATGTGCTGCCTTTCTTGCCAATGTGGGCACTTCATCTGACGCAACAGTAAATTTCAATGGCAATTCCTATCACTTGCCTGCTTGGTCTGTGAGCATCTTACCAGACTGCAAGAATGTAGTGCTTAATACTGCAAAGGTTAATTCTCAATCTACCATTTCAAGCTTCACAAAAGAAATTTTCAAAGAAGACAGTGATTCTTTAGAAGGTTCTACCTCTGGATGGAGTTGGACAAGTGAACCAGTAGGTATTTCAAAATCTGATGCATTCTCAAAGGTTGGATTACTGGAGCAAATAAATACAACAGCAGACAGAAGTGACTACTTGTGGTACTCATTGAGCATTAATCTTGATGATGGTGGTGGCCCTCAAACTGTCCTCCACATCGAATCACTTGGCCATGTCATTCATGCATTTATCAATGGGAAGCTTGCAGGGAGTGGAGTTCGTGTTGCTGCCAAAAAGTTGGACGTTCCTGTCACTCTTGTGGCTGGGAAGAACACAATTGATCTCCTGAGTCTTACCGTGGGACTTCAGAACTATGGAGCCTTTTTTGACACATGGGGTGCTGGAATAACTGGCCCTGTTAGATTGAACGGTTTGAAAAATGGGAGTTCTCTCGATTTCTCCTCCCAGCAGTGGACATATCAGGTTGGTCTTCAAGGTGAAAAATTGGGTCTTTCTGATGGATCTGGAAAATGGAACTCGGGGTCTACTTTACCTAAGAATCAACCATTGATTTGGTACAAGACAAGCTTTGCTGCTCCTTCTGGCAACAATCCAGTAGCAATTGACTTCACGGGAATGGGGAAAGGTGAGGCTTGGATTAACGGACAAAGCATAGGTCGATTCTGGCCCACATATATTGCTCCAAAGAGTGGTTGTAATGAGGCATGTGATTACAGAGGGTCTTATAATTCCAACAAATGTCTCAAAAATTGTGGAAAGCCATCACAATCGATATACCATGTACCTCGCTCTTGGTTGCGTCCAAGTGGGAACACACTTGTGTTGTTTGAGGAAAATGGAGGTGATCCAACTCAAATAACTTTTGCCACAAGACAGATAGAAAGCCTGTGTGCACATGTTTCAGATTCTCACCCACCACCTGTAGATTCATGGGACGCAGACACAGAATCAGGAAGAAAACTAGGGCCTGCACTTTCGCTGGAGTGTCCTAATCCTGATCAGGTTATCTCTTCCATTAAATTTGCAAGCTTTGGAACTCCTCGTGGGACTTGTGGCAACTTCAACCATGGCCGATGCAGCAGCAAAAGAGCACTCTCCATTATACAGAAGGCCTGCGTTGGATCAAGAAGTTGCAATATTGGAGTGTCGATTGATACATTTGGTGATCCATGCAGAGGAGTGGCAAAGAGTTTGGCAGTTGAAGCTGCTTGTACGTAA 2517 0.4418 MRTIHILFLFSWFLGVLAYTSFCANVTYDHRALVIDGKRRLLISGSIHYPRSTPEMWPDLIQKSKDGGLNVIETYVFWNKHEPVRGQYNFEGGNDLVKFVKLVGAAGLYVHLRIGPYVCAEWNYGGFPLWLHFIPGIQFRTDNEPFKREMQRFTAKIVDLMKKENLYASQGGPIILSQIENEYGNSDIEPRYGPAAIPYVKWAASMAISLNTGVPWVMCQQADAPDPIINTCNGFYCDQFTPNSNKKPKFWTENWSGWFRSFGGAVPYRPVEDLAFAVARFFQRGGTLQNYYMYHGGTNFDRTSGGPFISTSYDYDAPIDEYGIIRQPKWGHLKDVHKAIMLCEEALLATDPQIKSLGPNLEAAVYQAGSTCAAFLANVGTSSDATVNFNGNSYHLPAWSVSILPDCKNVVLNTAKVNSQSTISSFTKEIFKEDSDSLEGSTSGWSWTSEPVGISKSDAFSKVGLLEQINTTADRSDYLWYSLSINLDDGGGPQTVLHIESLGHVIHAFINGKLAGSGVRVAAKKLDVPVTLVAGKNTIDLLSLTVGLQNYGAFFDTWGAGITGPVRLNGLKNGSSLDFSSQQWTYQVGLQGEKLGLSDGSGKWNSGSTLPKNQPLIWYKTSFAAPSGNNPVAIDFTGMGKGEAWINGQSIGRFWPTYIAPKSGCNEACDYRGSYNSNKCLKNCGKPSQSIYHVPRSWLRPSGNTLVLFEENGGDPTQITFATRQIESLCAHVSDSHPPPVDSWDADTESGRKLGPALSLECPNPDQVISSIKFASFGTPRGTCGNFNHGRCSSKRALSIIQKACVGSRSCNIGVSIDTFGDPCRGVAKSLAVEAACT 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00277 838 Gene3D Glycosidases 20 342 - -
Accr13g00277 838 FunFam Beta-galactosidase 22 343 - -
Accr13g00277 838 FunFam Beta-galactosidase 591 730 - -
Accr13g00277 838 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Accr13g00277 838 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Accr13g00277 838 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Accr13g00277 838 PRINTS Glycosyl hydrolase family 35 signature 36 53 IPR001944 GO:0004553|GO:0005975
Accr13g00277 838 PRINTS Glycosyl hydrolase family 35 signature 169 184 IPR001944 GO:0004553|GO:0005975
Accr13g00277 838 PRINTS Glycosyl hydrolase family 35 signature 614 628 IPR001944 GO:0004553|GO:0005975
Accr13g00277 838 PRINTS Glycosyl hydrolase family 35 signature 112 131 IPR001944 GO:0004553|GO:0005975
Accr13g00277 838 PRINTS Glycosyl hydrolase family 35 signature 641 657 IPR001944 GO:0004553|GO:0005975
Accr13g00277 838 PRINTS Glycosyl hydrolase family 35 signature 57 75 IPR001944 GO:0004553|GO:0005975
Accr13g00277 838 SUPERFAMILY Galactose-binding domain-like 583 747 IPR008979 -
Accr13g00277 838 PANTHER BETA-GALACTOSIDASE RELATED 19 763 IPR001944 GO:0004553|GO:0005975
Accr13g00277 838 Gene3D - 456 585 - -
Accr13g00277 838 SUPERFAMILY (Trans)glycosidases 26 344 IPR017853 -
Accr13g00277 838 CDD Gal_Rha_Lectin_BGal 755 837 - -
Accr13g00277 838 FunFam Beta-galactosidase 292 419 - -
Accr13g00277 838 Pfam Glycosyl hydrolases family 35 33 339 IPR031330 -
Accr13g00277 838 Gene3D - 753 838 IPR043159 -
Accr13g00277 838 FunFam Beta-galactosidase 748 838 - -
Accr13g00277 838 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 171 183 IPR019801 GO:0004553|GO:0005975
Accr13g00277 838 Pfam Galactose binding lectin domain 760 837 IPR000922 GO:0030246
Accr13g00277 838 SUPERFAMILY Galactose-binding domain-like 401 570 IPR008979 -
Accr13g00277 838 ProSiteProfiles SUEL-type lectin domain profile. 752 838 IPR000922 GO:0030246
Accr13g00277 838 Gene3D - 600 730 - -
Accr13g00277 838 Pfam Beta-sandwich domain in beta galactosidase 347 417 IPR041392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00277 Accr-Chr13 2691211 2697413 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00277 23 691 Glycoside Hydrolase AT2G28470 74.336 0.0 1048
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00277 - - gmx:100804036 1424.07