Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00275 ATGAAGCTCATCTCGCTTGTTCTGCTTGCTCTGTTTCTGTCCACCTCTTCGGCTCAGTCGCCTGCGGCGGCTCCGGCTCCTACCCCGTCGTCGCCTCCCACAGACATCATCAGAATCCTCAACAAGGCTGGAGGATTCACCACTCTGATCCGTCTTCTCAAGACGACCCAAGTGGCTAACCAAATCAACTCACAGCTTTTGACTTCAAGTGGTGGCATCACATTTTTCGCCCCCACTGACAATGCCTTCTCCAGCCTCAAACCGGGATTCCTCAATTCCCTCAACGACCAGCAGAAGAATGAGCTCGTTCAGTTCCACATATTGCCCACATTGGTCTCCCTGTCAAATTTTGACACTTTGAGCAACCCGGTGCGAACGCAGGCCGGGGCGGATCCGGATCGGTTGGCCCTCAACGTTACGGGTTCCGGCAACCAAGTCAACATGACGACCGGGGTTGTCAATACCACCGTTGGTGGGACCGTGTATACAGATAGCCAGCTAGCGGTTTACCAAGTGGACAAGGTGCTTCTCCCCCGGGATTTCTTCGAGGCCAAGACTCCGGCACCGGCGCCGGCACCTGCATCGGCCAAGACGAAAGCCTCAAAGAAGAAAGCGGCTGAGGGACCTGCGTCTCCTGCGGATGACTCTGCGGCGATGAGCGTGAAACAGATGTGGGGGGCCATTGTTGGGGCTACAGTGGTGGGATTATGGTTGTGA 717 0.5593 MKLISLVLLALFLSTSSAQSPAAAPAPTPSSPPTDIIRILNKAGGFTTLIRLLKTTQVANQINSQLLTSSGGITFFAPTDNAFSSLKPGFLNSLNDQQKNELVQFHILPTLVSLSNFDTLSNPVRTQAGADPDRLALNVTGSGNQVNMTTGVVNTTVGGTVYTDSQLAVYQVDKVLLPRDFFEAKTPAPAPAPASAKTKASKKKAAEGPASPADDSAAMSVKQMWGAIVGATVVGLWL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00275 238 Pfam Fasciclin domain 45 178 IPR000782 -
Accr13g00275 238 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 224 IPR045003 -
Accr13g00275 238 SMART fasc_3 74 179 IPR000782 -
Accr13g00275 238 MobiDBLite consensus disorder prediction 187 216 - -
Accr13g00275 238 Gene3D FAS1 domain 12 179 IPR036378 -
Accr13g00275 238 ProSiteProfiles FAS1/BIgH3 domain profile. 33 176 IPR000782 -
Accr13g00275 238 SUPERFAMILY FAS1 domain 24 179 IPR036378 -
Accr13g00275 238 FunFam Fasciclin-like arabinogalactan protein 11 13 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00275 Accr-Chr13 2679704 2680420 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00275 - - gmx:100818760 264.618