Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00271 ATGTCTAAAACACCCTCTCTTTCCTCCTCTTATTTACTAGTCCTACTTGCCTTCTTCTATTCCACCACCACCACCTTGGCCCAATTATCTCCGGTCGCAGCTCCTCCTACCGCCTCCACATCCCCACCACCCACTTCTCTGCCCGCAACACCTCCGGCTGTGGCGGCCACACCTCCGGTGGCGGCTGCCACGGCACCTGCCCCGGTGTTTAGCACTGTTCCACTGGTACCAGTCACACCCAGCGCCGCCCCTGGGCCCGCTGTAGCTGTGGTCCCTAAAACTCCCACCACTGATGTTGTCCAAATACTCAGGAAGGCCAAGAGATTCACCGTCCTCATCCGCCTCCTCAAGACCACCCAGTTAATCAACCAGCTCAATTCTCAACTCGCCACCTCCAGCTCCGGCGGGTTAACCATTTTTGCCCCTGAGGACGCCGCCTTCTCGAAACTAAAAGCCGGCTTTCTTAACTCTCTTAATGACAGGCAAAAGGTGGAGCTTTTACAGTTCCACACCATTTCCACCTACATCTCTATCTCCAACTTCGATACCCTCACTAACCCCGTTCAGACTCAGGCCGGTGACGACCCCAAGAGGCTTCAACTTAACGTCACCACCTACGGAGGCAGCCAGGTCAGCATGACCACCGGCGCCGTCAATGCCTCCGTTACGGGAACCGTGTATACGGACAACAAACTTGCTATATATCAGGTGGACAAGGTGCTTCTTCCACTTGACATCGTGCTTCCTAAGGCTAATGCACCGGCACCGGGCCCAGCCGCCACAAAAGGAGATTCACCTAAAGCTGATAAAACTAAGGCAGCCGGAGGGGATCCAAGTGATGGTGATGACAGTGACACTAATGGTAAAGCCGTTCCGGCGGGTAGTTCCATGGGTTTGAAGGTAGAGGTAATGTGGGTACGTCTTGCACTTGGAGTTGCATTTGTGGCAGGAGCCATGATCATATGA 966 0.5435 MSKTPSLSSSYLLVLLAFFYSTTTTLAQLSPVAAPPTASTSPPPTSLPATPPAVAATPPVAAATAPAPVFSTVPLVPVTPSAAPGPAVAVVPKTPTTDVVQILRKAKRFTVLIRLLKTTQLINQLNSQLATSSSGGLTIFAPEDAAFSKLKAGFLNSLNDRQKVELLQFHTISTYISISNFDTLTNPVQTQAGDDPKRLQLNVTTYGGSQVSMTTGAVNASVTGTVYTDNKLAIYQVDKVLLPLDIVLPKANAPAPGPAATKGDSPKADKTKAAGGDPSDGDDSDTNGKAVPAGSSMGLKVEVMWVRLALGVAFVAGAMII 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00271 321 MobiDBLite consensus disorder prediction 36 54 - -
Accr13g00271 321 Gene3D FAS1 domain 84 243 IPR036378 -
Accr13g00271 321 Pfam Fasciclin domain 108 243 IPR000782 -
Accr13g00271 321 SUPERFAMILY FAS1 domain 90 244 IPR036378 -
Accr13g00271 321 MobiDBLite consensus disorder prediction 32 54 - -
Accr13g00271 321 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 10 290 IPR045003 -
Accr13g00271 321 MobiDBLite consensus disorder prediction 254 293 - -
Accr13g00271 321 FunFam Fasciclin-like arabinogalactan protein 11 81 243 - -
Accr13g00271 321 ProSiteProfiles FAS1/BIgH3 domain profile. 96 241 IPR000782 -
Accr13g00271 321 SMART fasc_3 138 244 IPR000782 -
Accr13g00271 321 MobiDBLite consensus disorder prediction 265 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00271 Accr-Chr13 2641764 2642729 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00271 - - gmx:100794350 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00271 13 2641764 2642729 Accr13g00271 13 2641764 2642729 ECH