Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00216 ATGTCGGGCCTGCTTAATTCTTCTCTGAATGGATCTGCTTCAAATCTTCCAGACAGTGCTGGGAGGTCATTTGCCACGTCATTCTCCGGCCAGTCTGGTGCTGCCTCCCCAGTTTTCCATCATAGTGGTGCTATCCAGGGATTGCACAACATCCATGGCAGCTTTAATGTTCCCAACATGCCAGGTACACTTGTGTCAAGAAATTCAACGATAAATAGCATCCCATCTGGAGGTGTTCAACAACCTACTGGAAGCCTTTCTAGTGGAAGATATGCATCAAATAATCTTCCTGTTGCTTTGTCCCAGCTAACTCTTGGAAGCTCTCATGGACATTCAGGAGTAACAAACAGAGGAGGATTGGGAGTATCCCCAATTTTGGGAAATGCAGGTTCTCGAATTACAAGTTCTATGGGGAACATGGTTGGTGGAGGGAATATTGGGAGGAGCATTAGCTCTGCTGGAGGATTGTCTGTGTCTGGTCTCGCTTCTCGTCTAAATTTAAGTGCAAACAGTGGATCTGGTGGTTTAAGTGTGCAAGGACAGAATCGGTTGCTAAGTGGCGTGCTTCCACAAGGATCACCCCAAGTTATTTCAATGCTAGGAAATTCCTATCCCAATGCTGGAGGTCCCCTTGCCCAAAGCCATGTTCAAGCAGTAAATAATTTGAACTCAATGGGGATGTTGAATGATATGAATTCAAATGACAGCTCACCTTTTGACATCAATGACTTTCCTCAATTGACGAGTCGACCCAATTCTGCTGGAGGGCCCCAAGGACAGTTGGGTTCTTTGCGAAAGCAGGGTCTTGGAGTTAGTCCCATTGTCCAGCAAAACCAAGAATTTAGCATTCAAAATGAAGATTTCCCAGCTTTACCAGGATTTAAAGGTGGCAATGCAGATTATGCTATGGATATGCACCAGAAAGAACAACTTCATGAGAATGCCGTGCCCATGATGCAATCTCAACATTTTTCTATGGGAAGGTCTTCTGGTTTCAGCTTAGGGGGGACATATTCATCACATCGTTCCCAGCAACAACAGCATGCTCCATCTGTCAGTAGTGGTGGTTCCTCCTTTTCATCTGCAAATAATCAGGAACTTCTCCATCTACATGGGTCAGATGTATTTCCAGCATCGCATTCAACCTATAATTCCCAGGCCAGTGGACCTTCTGGCATTGGATTAAGGCCTCTAAATTCTCCAAATACTGTTTCTGGTATGGGATCATATGACCAGCTTATCCAGCAATACCAACAGCACCAAAACCAGTCCCAGTCGCAGTTTCGTCTTCAACAAATGTCAACTGCAAATCAGTCTTTTAGAGATCAAGGCATGAAATCCATGCAAACTTCCCAATCAACACCAGATCCATTTGGTTTGCTTGGCTTGTTAAGTGTGATCAGGATGAGTGATCCTGATTTGACATCTCTTGCACTTGGAATTGATCTTACAACACTTGGGTTAAATTTAAATTCATCAGAAAATCTCCACAAGACTTTTGGATCTCCATGGTCTGATGAACCGGCTAAGGGTGATCCAGATTTCACAGTGCCACAATGTTATTATGCTAAACAGCCGCCTGCCCTGCATCAAGGTTATTTTTCAAAGTTTACAGTGGAAACGTTGTTTTACATATTTTACAGTATGCCCAAAGATGAAGCTCAATTATATGCCGCAAATGAGCTTTACAATAGAGGCTGGTTTTATCACAAAGAACTTCATTTGTGGTTTATTAGAGTTTCTAACATGGAGCCACTTGTTAAAACAAACACGTATGAGAGGGGATCTTATCACTGCTTCGATCCAAACACATTTGAAATAATTCGTAAGGATAATTTTGTCGTTCATTATGAGTTGTTGGAAAAACCTACCCCTGCCCCAGCATTGAGGGGTAAGGGAAACTTGTGA 1908 0.4313 MSGLLNSSLNGSASNLPDSAGRSFATSFSGQSGAASPVFHHSGAIQGLHNIHGSFNVPNMPGTLVSRNSTINSIPSGGVQQPTGSLSSGRYASNNLPVALSQLTLGSSHGHSGVTNRGGLGVSPILGNAGSRITSSMGNMVGGGNIGRSISSAGGLSVSGLASRLNLSANSGSGGLSVQGQNRLLSGVLPQGSPQVISMLGNSYPNAGGPLAQSHVQAVNNLNSMGMLNDMNSNDSSPFDINDFPQLTSRPNSAGGPQGQLGSLRKQGLGVSPIVQQNQEFSIQNEDFPALPGFKGGNADYAMDMHQKEQLHENAVPMMQSQHFSMGRSSGFSLGGTYSSHRSQQQQHAPSVSSGGSSFSSANNQELLHLHGSDVFPASHSTYNSQASGPSGIGLRPLNSPNTVSGMGSYDQLIQQYQQHQNQSQSQFRLQQMSTANQSFRDQGMKSMQTSQSTPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSDEPAKGDPDFTVPQCYYAKQPPALHQGYFSKFTVETLFYIFYSMPKDEAQLYAANELYNRGWFYHKELHLWFIRVSNMEPLVKTNTYERGSYHCFDPNTFEIIRKDNFVVHYELLEKPTPAPALRGKGNL 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00216 635 Gene3D - 448 631 IPR038635 -
Accr13g00216 635 FunFam probable NOT transcription complex subunit VIP2 isoform X1 448 629 - -
Accr13g00216 635 MobiDBLite consensus disorder prediction 327 362 - -
Accr13g00216 635 Pfam NOT2 / NOT3 / NOT5 family 498 620 IPR007282 GO:0006355
Accr13g00216 635 PANTHER CCR4 NOT-RELATED 45 622 IPR040168 GO:0030015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00216 Accr-Chr13 2057624 2062101 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00216 K12605 - qsa:O6P43_028301 1061.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00216 13 2057624 2062101 Accr13g00216 13 2057624 2062101 ECH