Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00215 ATGGATGATGAACTGCTTGAGTTGCAAAGACAATTCGAGTTCGCTCAGCAGGCAAAGTCGAGTATTCGATTATCGGAGAGAAACGTTGTTGAATTGGTTCAGAAATTGCAGGAGCTTCACATCATTGATTTCGACCTTCTTCACACTGTCTCTGGCAAAGAGTACATCACTCCCGAGCAACTGAGGAATGAGATGGTGGCTGAAATTAAGAAGCTAGGGCGTGTTTCTCTGATTGATCTCGCTGATGCTACTGGAGTCGATTTATACCATGTTGAGAAGCAGGCTCAACAAGTTATAAAAGATCATCCAGAGATGATGCTGATTCAAGGGGAAATCATGTCAGAATCTTATTGGGATTCCATAGCTGAAGAAGTGAACGAGAGGCTTCAGGAATGTAGTCAGATTGCACTTACAGAACTTGCTGCACAATTAAATGTCGGTCTAGAATTGATTGCCTCCATGTTGGAGCCTCGTCTTGGAACTATGGTGAAGGGCAGGCTTGAAGGTGGGCAGTTGTATACTCCTGCATATGTAGCTCGTGTTGGTGCCATGGTTCGAGGTGCTGCCAGGGGCATCACTGTTCCGACAAATTTGTCATTGTTATGGAGCTTGTTACAACAATTACTGCAAGAAATGGATGGAACCAGCAGTGTCGTTACTGAAGGAGCTTTCTTCCAGTCACTTTTTAATGGGCTTGTGAAGGAAAGTGAGATTCTAGGATCACTTCGTGCTGGAATACATTGGACACCTGCGGTCTTTGCCATTGCTCAAAAGGAATCGGTGGATTCATTCTTCTCACAGAATTCTTTTATCAGCTATGACGTTCTACAGAAACTTGGAATTCCCCAGCCCATTCAATTCTTGCAGTCAAGATATCCTGAAGGTATACCTCTGGATACAACGTTTGTCCACCCGTCAATGATTGAAATGCTGGATGCTGCTACTGAGGATGCCCTTGAGCATGGTAGTTGGAGTGATGCTCTTTCCTTATTGCCCTCTTCCTTCACTCCTCAAGATGCATCTAAAATGTTGACCTTCTGCCAATCTGTTCAATCTGCTCTGAAGTCTAACCAAGCACACATTTTTGGGGATTTTTATGTTTTGAGCAACAGCTTTATGAAGGGCATCTGTGAGCACTTGGTGAAAGAAATGGAAACACTAGGTGTTTCAGGGTCTTCTGGCATTAAAATGTTTAGTGATTCACTAGTAGCGAATGTAGGAAAAATTGGGCAGGACTTAATTCGATCGAATGAGTCAAATGAAACTGCACTTGATGGCAGTGCCATTAAACATGTTGATAGAGGATCAAAGAAGAAAAAGGGAAAGGCTTCTGGTAACATGGTGGCAAATGTGTCTGACAGTGCTGCAGAGATTCCGGAACAGACTTCCACAAAATCTAAGAGAAGCCAGAGAAGGGGCAAGGAAACCTTTTCCTCACAACTGTCAGATTCAAAAATTGGTTCTAGGAAAGAATCTCTTAAAGTGAAGGAGGATAGCCTCAGTAGTCCTTCAGATGAGTGGATTATGCAGAAGATTATGACTTTGGTTCCCGATTTCGAAGAACAATGCTTGGATGATCCTGAAACAATTCTGAGGCCTTTGGCTAATCATTTAAGGCCTACAATAATGGCTTCTTGGATGGAGAAGAAGAAAGCAATGTTTACAGAAAATTCTGAAAGAATGAAATCTTTGCTTGATAATTTGCAAAAGAAACTTGATGAGTCTTTCTTAAACATGCAGCTTTATGAAAAAGCTTTAGAATTGTTTGAAGATGACCAATCAACCTCCGTTGTTTTGCATAGGCATTTATTGAGAACAGTAGCTGCCCCTATGGTGGATATGCTTCTTCGTATATTGGATGAGCACAACAAGTTAAAGAACGGGCTTGAAGTGGAGGAAGCTTCAAATTCAGAACTGCTCACACTTAGTCCTGGAGACAGAGCTGCTATTTCGAAGAGTTTCCCGGGAGCGCTTGGTAAAAAAGCTCTGGATGTTATTGAAGCATTGGAAGGAAAGCGGGTGGAAACGTTTATGGATGCTTTTAGAGAGGTAGCAGAAGAGAGTGGGTTGTCTTTGAAAAAGCTTGACAAGAAACTTGAAAGAACACTTTTACACTCATATCGTAAGGAATTGACATCTCAAATTTCTTTTGAGACTGATCCAATATCACTTCTGGCAAAAGTTGTGTCTTTACTTTACGTGCAGGTTTACCACAAAGCTCTTCAAGCCCCTGGAAGGGCCATTTCTGTCGCCATCTCCCAACTGAAGGACAAGTTAGATGAGTCGTCATTCAAGATTTTGACCGATTATCAGAGCGCTACGGTGACTCTTCTGGCATTATTAGCAGCTGCAACTGGTGATGAAGAGGATTGTTCATCTGACAGAATATTGAGCAAACGGGAGCTTTTGGAGAGCCAAATGCCATCATTGAAAAGCCTAGTCTTGAGTTCCTCCCAATCGTCATAG 2466 0.4238 MDDELLELQRQFEFAQQAKSSIRLSERNVVELVQKLQELHIIDFDLLHTVSGKEYITPEQLRNEMVAEIKKLGRVSLIDLADATGVDLYHVEKQAQQVIKDHPEMMLIQGEIMSESYWDSIAEEVNERLQECSQIALTELAAQLNVGLELIASMLEPRLGTMVKGRLEGGQLYTPAYVARVGAMVRGAARGITVPTNLSLLWSLLQQLLQEMDGTSSVVTEGAFFQSLFNGLVKESEILGSLRAGIHWTPAVFAIAQKESVDSFFSQNSFISYDVLQKLGIPQPIQFLQSRYPEGIPLDTTFVHPSMIEMLDAATEDALEHGSWSDALSLLPSSFTPQDASKMLTFCQSVQSALKSNQAHIFGDFYVLSNSFMKGICEHLVKEMETLGVSGSSGIKMFSDSLVANVGKIGQDLIRSNESNETALDGSAIKHVDRGSKKKKGKASGNMVANVSDSAAEIPEQTSTKSKRSQRRGKETFSSQLSDSKIGSRKESLKVKEDSLSSPSDEWIMQKIMTLVPDFEEQCLDDPETILRPLANHLRPTIMASWMEKKKAMFTENSERMKSLLDNLQKKLDESFLNMQLYEKALELFEDDQSTSVVLHRHLLRTVAAPMVDMLLRILDEHNKLKNGLEVEEASNSELLTLSPGDRAAISKSFPGALGKKALDVIEALEGKRVETFMDAFREVAEESGLSLKKLDKKLERTLLHSYRKELTSQISFETDPISLLAKVVSLLYVQVYHKALQAPGRAISVAISQLKDKLDESSFKILTDYQSATVTLLALLAAATGDEEDCSSDRILSKRELLESQMPSLKSLVLSSSQSS 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00215 821 MobiDBLite consensus disorder prediction 447 463 - -
Accr13g00215 821 PANTHER E3 UFM1-PROTEIN LIGASE 1 2 820 IPR018611 GO:0061666|GO:0071569
Accr13g00215 821 Pfam E3 UFM1-protein ligase 1 4 288 IPR018611 GO:0061666|GO:0071569
Accr13g00215 821 MobiDBLite consensus disorder prediction 425 500 - -
Accr13g00215 821 Coils Coil 551 585 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00215 1 787 EF-hand Containing Proteins AT3G46220 63.151 0.0 972
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00215 K22755 - gmx:100808087 1197.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00215 13 2049494 2056169 Accr13g00215 13 2049494 2056169 ECH