Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00135 ATGGCGGAGGCAAACACTAGTGGCGGTAACAACAGGTGGTCTCTTCTGGGCATGACGGCTCTTGTTACTGGTGGAACCAAAGGAATCGGGTATGCTATTGTGGAGGAGTTGGCACAATTAGGAGCTGTGGTACATACTTGCTCCAGGAATGAATCTGATCTTAATGAATGCTTACAACGATGGAACGCTAAGGGATTTCAAGTTACTGGATCTGTTTGCGATATGGTGTCCTCTGCTCAAAGACAAGACCTTACCACTAAAGTCTCCTCTCTCTTTCACGGGAAACTTAATATCCTTGTGAACAATGCAGGAACTAACATGCCAAAACCAACCCTAGACAGTACAGCAGAAGATTTCTCATTTCTGATGAGTACAAATTTGGAATCAGCATACCATATAAGCCAACTTGCACACCCTCTTCTAAAAGCTTCAAAAGCTGCAAGCATTGTTTTTATATCCCCCGTTGCTGGGCTGACAGCTATAAACGGAACATCAATATATGGTGCAGCAAAAGGAGCAATGAACCAGCTAGCCAAGAACCTGGCATGTGAGTGGGCAAAAGACAATATAAGGACCAATTGCATTGCACCAGGCCCCATTAAGACACGTCTCTCTGAAGATTTTCTCAAAGATGAAAAGGCACACGAGACTTTCATCAATAGAATCCCTTTGCAACGGATTGGGGAGCCAGACGAGGTGTCTTCCATGGTGGCATTCCTCTGCTTACCAACAGCCTCATACATAACGGGACAGATCAAATGCATCGACGGAGGATTTACTGTGTTTGGTTTGTGA 795 0.4478 MAEANTSGGNNRWSLLGMTALVTGGTKGIGYAIVEELAQLGAVVHTCSRNESDLNECLQRWNAKGFQVTGSVCDMVSSAQRQDLTTKVSSLFHGKLNILVNNAGTNMPKPTLDSTAEDFSFLMSTNLESAYHISQLAHPLLKASKAASIVFISPVAGLTAINGTSIYGAAKGAMNQLAKNLACEWAKDNIRTNCIAPGPIKTRLSEDFLKDEKAHETFINRIPLQRIGEPDEVSSMVAFLCLPTASYITGQIKCIDGGFTVFGL 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00135 264 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 IPR002347 -
Accr13g00135 264 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 IPR002347 -
Accr13g00135 264 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 18 262 IPR036291 -
Accr13g00135 264 Pfam Enoyl-(Acyl carrier protein) reductase 26 260 - -
Accr13g00135 264 PANTHER TROPINONE REDUCTASE 11 261 IPR045000 GO:0016491
Accr13g00135 264 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 154 182 IPR020904 GO:0016491
Accr13g00135 264 FunFam Short-chain dehydrogenase reductase 5 262 - -
Accr13g00135 264 Gene3D - 2 263 - -
Accr13g00135 264 PRINTS Glucose/ribitol dehydrogenase family signature 94 105 IPR002347 -
Accr13g00135 264 PRINTS Glucose/ribitol dehydrogenase family signature 223 243 IPR002347 -
Accr13g00135 264 PRINTS Glucose/ribitol dehydrogenase family signature 19 36 IPR002347 -
Accr13g00135 264 PRINTS Glucose/ribitol dehydrogenase family signature 188 205 IPR002347 -
Accr13g00135 264 PRINTS Glucose/ribitol dehydrogenase family signature 167 186 IPR002347 -
Accr13g00135 264 PRINTS Glucose/ribitol dehydrogenase family signature 141 157 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00135 Accr-Chr13 1225479 1226783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00135 10 264 Miscellaneous Gene Families AT2G29290 63.529 1.27e-115 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00135 K08081 - gmx:100780806 383.259