Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00112 ATGGCCGAGAAGGATAATTTATATTCTTTTCCGGGATACGAGAGGAGAATATTAATTTTCAGTTTCTTCAAGGATGCTAGACTAGTTTTCAAATCTGACAATCTCGGTCGGGAAATATTGTCCATCGCATTGCCTGCAGCAATGGCTTTGACGGCCGACCCTATTGCCTCACTGGTTGACACCGCATTCATTGGCCAAATTGGTCCTGTAGAGCTCGCTGCTGTAGGTGTTTCCATAGCACTATTCAATCAAGTATCAAGGGTTGCGATATTCCCACTTGTCAGTGTCACAACTTCTTTTGTTGCTGAGGAAGATACTCTTGGCGGAGTGAGTTCTCAAGAAGAGGAGAATGATAACTTGGAAGAAGGTGCACCTGTGGATGCTGAAACCAAAGAGTTTATACCACAAAAAGATACTTGTGCAGATGTTCACGACTCAGATTCGGTTGGTGGAAGCTTGAATATAGTTAAAGCAGAGAGAAGGAAGATCCCTTCAGCTTCATCAGCTCTTGTTATTGGTGGCATTCTTGGCATCATCCAGGCAATATTCCTCATATCTGCTGCAAAACCTTTGTTGAACTTCATGGGAGTAAAATCTGACTCCCCTATGCTAAACCCAGCTCAGCAGTACCTGACATTGAGGTCCCTAGGTGCTCCTGCCGTGCTTCTTTCATTAGCTATGCAAGGAGTCTTCCGAGGAATTAAAGACACTAGAACTCCTTTATATGCTACAGTGGCTGGAGACGTTACCAACATAGCACTGGATCCTCTATTTATGTTTGTATTCCGCCTGGGTGTCAGTGGTGCAGCCATTGCCCATGTTATATCTCAGTACCTAATTTCAGTTATACTCCTGTGGAGATTGATTGGACAAGTTGACCTTGTCCCCCCTTCCATGAAGCATCTACAATTTGATCGATTTCTTAAAAATGGTTTTCTATTATTGATGAGGGTCATTGCTGTAACATTCTGTGTGACACTTTCTGCATCACTAGCTGCACGGCAAGGATCAACATATATGGCTGCATTTCAAGTCTGCTTGCAGGTTTGGTTGGCAACATCTCTTCTTGCTGATGGGCTGGCCGTTGCTGGGCAGGCAATCCTTGCTGGTGCATTTGCTAATAAGGATCATGACAGGGCTATAGCAACCGCTACCCGAGTACTACAGATGGGCTTGGTTTTGGGATTGGGGCTAGCGATTTTCCTCGGGACAGGGCTGCATTTTGGGGCTAGAATATTCACAAAAGATATTAATGTCATCCACCTTATCAGTATTGGAACTCCGTTCGTTGCAGCCACTCAACCCATCAATTCTCTGGCATTTGTATTTGATGGCGTTAACTTTGGGGCATCTGATTTTGCATATTCAGCCTTCTCAATGCTTGCGGTGGCAATTGTCAGCATCATTTGTCTACTTGTATTGTCCTCTGCTGGTGGCTTCATTGGTATCTGGGTTGCTTTGACCATTTATATGAGTCTCAGGGCATTTGCTGGCTTCTTGAGGATTGGAACGGGAACAGGGCCTTGGGGCTTCCTTAGGAGCTGA 1545 0.4492 MAEKDNLYSFPGYERRILIFSFFKDARLVFKSDNLGREILSIALPAAMALTADPIASLVDTAFIGQIGPVELAAVGVSIALFNQVSRVAIFPLVSVTTSFVAEEDTLGGVSSQEEENDNLEEGAPVDAETKEFIPQKDTCADVHDSDSVGGSLNIVKAERRKIPSASSALVIGGILGIIQAIFLISAAKPLLNFMGVKSDSPMLNPAQQYLTLRSLGAPAVLLSLAMQGVFRGIKDTRTPLYATVAGDVTNIALDPLFMFVFRLGVSGAAIAHVISQYLISVILLWRLIGQVDLVPPSMKHLQFDRFLKNGFLLLMRVIAVTFCVTLSASLAARQGSTYMAAFQVCLQVWLATSLLADGLAVAGQAILAGAFANKDHDRAIATATRVLQMGLVLGLGLAIFLGTGLHFGARIFTKDINVIHLISIGTPFVAATQPINSLAFVFDGVNFGASDFAYSAFSMLAVAIVSIICLLVLSSAGGFIGIWVALTIYMSLRAFAGFLRIGTGTGPWGFLRS 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00112 514 Pfam MatE 166 257 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Accr13g00112 514 Pfam MatE 316 469 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Accr13g00112 514 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 19 513 IPR044644 -
Accr13g00112 514 CDD MATE_DinF_like 35 504 IPR044644 -
Accr13g00112 514 NCBIfam MATE family efflux transporter 45 484 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00112 Accr-Chr13 1076077 1080277 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00112 K26938 - gmx:100170750 809.29