Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00109 ATGGTGCAATATAACTTCAAGAAGATAACTGTGGTTCCTAACGGGAAGGACTTCATTGACATAATCCTTTCTCGCACTCAGCGTCAAACGCCGACAGTTGTGCATAAAGGATATAAGATATCCCGCCTCCGTCAATTCTACATGCGCAAAGTAAAGTATACACAACAAAATTTTCATGAAAAACTCTCCACTATCATTGATGAGTTCCCTCGGCTTGATGGTATTCACCCATTCTATGGCGATCTCCTCCATGTTCTCTACAATAAGGACCATTACAAGCTTGCACTTGGACAAGTCAATACTGCTAGAAACCTTATTGGGAAGATTTGTAGGGACTATGTGAAATTATTGAAGTATGGTGATTCACTATATAGATGCAAATGTCTGAAGGTTGCTGCTCTTGGCCGTATGTGCACTGTGATTAAGAGGATTGGCCCAAGTTTGGCTTATCTAGAGCAGGTGAGACAGCACATGGCAAGGCTCCCATCAATAGATCCAAACACGAGGACTGTCTTGATTTGTGGTTACCCTAATGTTGGCAAGAGCTCATTCATTAACAAAATTACCAGAGCTGATGTGGATGTGCAGCCCTATGCTTTCACCACTAAGTCACTCTTTGTCGGTCATACAGACTACAAATACCTAAGGTACCAAGTAATTGATACACCAGGTATTCTGGACCGGCCTTTTGAAGATCGAAACATTATTGAGATGTGCAGCATTACTGCCCTTGCTCATTTGCGAGCTGCTATATTGTTTTTCTTAGACATATCTGGATCTTGTGGTTATAGTATCGCACAACAGGCAGCCCTATTTCACAGCATCAAGTCTCTGTTTATGAACAAGCCATTAATAGTAGTCTGCAATAAAACTGATTTGCAACCCCTGGAAGGGGTATCCGAGGAAGACAAGAAGTTGATCATGGAGATGAAAGCTGAGGCGTTGAAGACTCTGGTTGGTCAAGGAGGTGAGCCTACAAATGATGAAAGTGTGTTGTTGACCATGAGCACTTTGACAGAAGATGGGGTAATTGCTGTAAAAAATGCAGCATGTGAAAGATTGTTAAATCAAAGGGTGGAGATAAAGATGAAATCGAAAAAGATAAATGACTGCTTGAATAGATTTCATGTTGCAGAGCCAAAACAACGTGACCAGAAGGAAAGGCGGCCTTTTATTCCCCAAGCGGTCTTAGAAGCTAAGGCCAAGCAAGCAGCAGAAAAGGAAAAGAGAAAAACTGAAAAGGATCTGGAAGATGAGAATGGTGGTGCAGGTGTATACTCAGCAAACTTGCGGAAGAACTATATTTTGGCTAATGATGAATGGAAAGAAGATGTGCTGCCAGAAATTTTGGATGGGCACAATGTGTATGATTTCATTGATCCTGATATCCTGAATAGGCTTGAAGAACTGGAAAGGGAAGATGGGCTAAGACAGGCTGAGGAGTTAGATGACGATTTTGAGATAGACGGGAATGAGTTGAGTCCGGAAGAACAGGAAGCTTTAGCCGCAATAAGAAAAAAGAAAAGCTTGCTCATCCAAGAGCATAGGAAGAAAAAGAGTACTGCAGAGAGCAGGCCTATTGTTCCAAGAAAATATGACAAGGATAGGAAGTTTACCACAGAGAGAATGGGGAGGCAGCTTTCAACTTTGGGGCTTGATCCCTCTTTGGCAATTGACAGGGCACGCAGCAGATCTGTTTCTAGGAGAGGTAGGAAGAGGGAAAGATCTCCTGAGAACAGAGGTGCTGATGTGATGGATATAGATGGTGACTCATCCAGCAAGAAGCAGCGTACTATATCTAGATCAAGGTCCAGGTCAGTTTCACGGCCACCATCCGAATTTGTGCCTGGTGAGGGCTTGAAGGATTCTGCTCAAAAAATTAAGGCAGTAAAACTTGCTAAGAAATCTGTCAAGAAGAGGAACAAGGATGCTCGTCGTGGAGAAGCTGATAGGGTTATTCCTACTTTGAAGCCCAAGCACTTGTTTTCTGGGAAGCGTTCAATTGGAAAAACCCAAAGACGGTGA 2025 0.4281 MVQYNFKKITVVPNGKDFIDIILSRTQRQTPTVVHKGYKISRLRQFYMRKVKYTQQNFHEKLSTIIDEFPRLDGIHPFYGDLLHVLYNKDHYKLALGQVNTARNLIGKICRDYVKLLKYGDSLYRCKCLKVAALGRMCTVIKRIGPSLAYLEQVRQHMARLPSIDPNTRTVLICGYPNVGKSSFINKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAILFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIVVCNKTDLQPLEGVSEEDKKLIMEMKAEALKTLVGQGGEPTNDESVLLTMSTLTEDGVIAVKNAACERLLNQRVEIKMKSKKINDCLNRFHVAEPKQRDQKERRPFIPQAVLEAKAKQAAEKEKRKTEKDLEDENGGAGVYSANLRKNYILANDEWKEDVLPEILDGHNVYDFIDPDILNRLEELEREDGLRQAEELDDDFEIDGNELSPEEQEALAAIRKKKSLLIQEHRKKKSTAESRPIVPRKYDKDRKFTTERMGRQLSTLGLDPSLAIDRARSRSVSRRGRKRERSPENRGADVMDIDGDSSSKKQRTISRSRSRSVSRPPSEFVPGEGLKDSAQKIKAVKLAKKSVKKRNKDARRGEADRVIPTLKPKHLFSGKRSIGKTQRR 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00109 674 CDD NOG 169 355 - -
Accr13g00109 674 MobiDBLite consensus disorder prediction 402 420 - -
Accr13g00109 674 Pfam NOGCT (NUC087) domain 410 463 IPR012973 -
Accr13g00109 674 PIRSF NOG1 1 674 IPR024926 -
Accr13g00109 674 Gene3D - 3 161 - -
Accr13g00109 674 PRINTS GTP1/OBG GTP-binding protein family signature 171 191 IPR006073 GO:0005525
Accr13g00109 674 PRINTS GTP1/OBG GTP-binding protein family signature 219 234 IPR006073 GO:0005525
Accr13g00109 674 PRINTS GTP1/OBG GTP-binding protein family signature 192 210 IPR006073 GO:0005525
Accr13g00109 674 Coils Coil 402 422 - -
Accr13g00109 674 MobiDBLite consensus disorder prediction 571 597 - -
Accr13g00109 674 MobiDBLite consensus disorder prediction 402 422 - -
Accr13g00109 674 Gene3D - 162 374 IPR027417 -
Accr13g00109 674 MobiDBLite consensus disorder prediction 515 542 - -
Accr13g00109 674 MobiDBLite consensus disorder prediction 513 674 - -
Accr13g00109 674 FunFam Nucleolar GTP-binding protein 1 3 161 - -
Accr13g00109 674 FunFam Nucleolar GTP-binding protein 1 162 374 - -
Accr13g00109 674 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 169 355 IPR031167 GO:0005525
Accr13g00109 674 Pfam Nucleolar GTP-binding protein 1 (NOG1) 236 292 IPR010674 GO:0005525
Accr13g00109 674 Pfam NOG1 N-terminal helical domain 6 165 IPR041623 -
Accr13g00109 674 PANTHER NUCLEOLAR GTP-BINDING PROTEIN 1 3 509 - -
Accr13g00109 674 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 312 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00109 Accr-Chr13 1050125 1052149 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00109 K06943 - tcc:18599273 1140.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00109 13 1050125 1052149 Accr13g00109 13 1050125 1052149 ECH