Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00095 ATGTCTTCTTCAACCGACTCTGCCACCACTGGCACCTCCCCTGACCACCTTCAAACGCCAACATTAGACCGCGAATCTTCCGCTCTCCTCCACTCCATTTCCGAGCATGGAGGCTATGCTTACGTCAGCATGGCCGCCCTCGGTGACTTCCGAGCTGCCGAAGCTGCCCGTGAGATGGCCTGGGAGCAGCTTCATTCGGGCCCTCCGCACTCTGTCTTCCCAGTTTGGCGCGACGCTTACTCTATGGCGTGCCTTCACCTTTCCAAGCACCATTACATCAACGGTGAGCTCAAGGAGGCTCTCAGGTCTTTGGATATGGGACTGATCATGGGGGGATCGCTTCTAAAGAAAGACTTGAGCTCTGCTGCTGACAAAGTATCGGAGAGGCTCAGGAACATTATGGCTTCCAAACAAAGCCACGAAGGCTTTGAGATGTCCAAGCATCGACTTGTCAGTCACCAACTTAACCAGGCAGAGGTGCACAAACTTCTACCGTTAAACTCCCTTTCTCATAAAATCGTGGAGAAGAGATCTGCTCTGTCATTGGAAAGGTTCCTAGAAGATTATTACCGGTCTGGCTCCCCGGTTATCATCAGTGACTGTATAGCTCACTGGCCAGCCAAAACAAAATGGAATGACGTAGATTATTTGAAAAAAGTTGCTGGTGATCGCACAATTCCAGTAGAGGGTGGGAAGGGCTATTTATGTGCAGAGGGCAAGCAAGAGTTAATTACATTTTCAGAGTTTCTTCAGCGTATAGAGTCCCATGCCTGCTCTTCTGCCGGTCCTACATATCTTGCTCAGCATCCACTATTTGATCAGATAAATGGGCTTCGGAAAGATATTTGTATTCCTGACTACTGTTTTGCTGGTGGAGGGGAGCTAAGATCTCTCGATGCTTGGCTTGGTCCTGCGGGGATGGTAACACCATTACACCATGATCCACACCATAATATACTGGCTCAGGTTGTTGGGAAGAAATATGTGAGGCTCTACCCCCCATCTGTGTCCAAGGAACTTTACCCTTGTACTGAAACAATCCATACGAATTCCAGCCAGATTGATCTAGATAACATAGATGAAAAGATGTTTCCTGGGGTGCAAGACTTGGAATTCGTAGACTGTATATTAGAGGAGGGTGAATTGCTATATATCCCGGAAAAATGGTGGCACTATGTCCGCTCTCTGACAACAAGTTTCTCCGTTAGTTTTTTGTGGAGTAAGGCCCAAGGTTCAGCGACATCCTGA 1248 0.4824 MSSSTDSATTGTSPDHLQTPTLDRESSALLHSISEHGGYAYVSMAALGDFRAAEAAREMAWEQLHSGPPHSVFPVWRDAYSMACLHLSKHHYINGELKEALRSLDMGLIMGGSLLKKDLSSAADKVSERLRNIMASKQSHEGFEMSKHRLVSHQLNQAEVHKLLPLNSLSHKIVEKRSALSLERFLEDYYRSGSPVIISDCIAHWPAKTKWNDVDYLKKVAGDRTIPVEGGKGYLCAEGKQELITFSEFLQRIESHACSSAGPTYLAQHPLFDQINGLRKDICIPDYCFAGGGELRSLDAWLGPAGMVTPLHHDPHHNILAQVVGKKYVRLYPPSVSKELYPCTETIHTNSSQIDLDNIDEKMFPGVQDLEFVDCILEEGELLYIPEKWWHYVRSLTTSFSVSFLWSKAQGSATS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00095 415 ProSiteProfiles JmjC domain profile. 258 415 IPR003347 -
Accr13g00095 415 MobiDBLite consensus disorder prediction 1 20 - -
Accr13g00095 415 Gene3D Cupin 172 407 - -
Accr13g00095 415 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 79 409 - -
Accr13g00095 415 FunFam lysine-specific demethylase JMJ30 173 406 - -
Accr13g00095 415 Pfam Cupin-like domain 184 407 IPR041667 -
Accr13g00095 415 SUPERFAMILY Clavaminate synthase-like 175 407 - -
Accr13g00095 415 SMART cupin_9 264 413 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00095 Accr-Chr13 831699 835344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00095 168 393 Acyl Lipid Metabolism Gene Families AT3G45880 26.642 1.41e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00095 K24444 - qsa:O6P43_000107 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00095 13 831699 835344 Accr13g00095 13 831699 835344 ECH