Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00085 ATGATGATAAAGCCGCGACTACTGTACCAATCGCATCAAGCCAACCGAAGGCTCAGCTTTCAGGAGAGAACTTTAGCCCTATCGCTGCCAATATGGTCTGAGAGGTCCGTGAGGAGGCAACTTGGGAGCCAAAAGGTGAAGGCCAAGAAGCATCAAATCTTTGTTCCTCGCAGTGCTCAAGTGAGCTCTCCTCTAGTTACTCATGAGACCACTGAGACGGACGATAGCTTCAAGGTTAAGGCCATAGTAAACGTCAAGCTGGCCAAGGCTGGTTTTCTCTCTAGCTTGAGCTTAGATAGACGAATTGATGATATCATCGACCTGCTGGGAAAATCTCTCCTCTTGGAACTTGTTAGCTCCCAACTTGATTCTGAGACGGGAGAGGAGAAAGTGACGATGGAGGCATATGCCCACAAAGGAAAAAGACGAGAGGAATGGGTTGAGTACGTGGCAGATTTTCAAGTGCCAAAGGACTTTGGGGAGGTTGGTGCAGTTCTGGTGGAGAATGAGCATCACCATGAGATGTATGTCGACACTATTCTTCTTCACGGCTTCCCTCATCAGGATCCCATTCCTATTCACTGCGCATCTTGGGTTCACTCCAAGTTTCACAATCCTACCAAACGAGTTTTCTTCACAGACAAGAGATTGTACCGAGGAAAATGGCGTTTTGGCCGCAACAGGAGTTACATACCGTCGGAGACGCCGGGTGGCCTGAAAAGGTACAGAGAAGAGGAGCTGAGGAATTTAAGAGGGAACGGAGAAGGAGAAATGAAGAGTTTCGAGAGAATATACGATTTTGACGTATACAATGACATCGGAGATCCTGATAAGAGCCTCCATCTCCAAAGACCTCCTCTTGGTGGTCGTCAGCGTCCCTATCCCCGACGTTGCCGTACTGGTCGTCCTCCTTCTGACGCAGATCCAGTGGCTGAGAAGAGAGTGGGGAGATTTTACGTTCCGAGGGATGAATGCTTCTCGGAGGTGAAGGAGCTGACATTTTCAACCAAGACGCTCCACTCGGTGTTGCTCATATTGCTTCCAACTCTGGGCAGGGTGATCAGAGACAAGGATCTGCCATTCTCATACTTCCACGACATTGATTCACTTTTCAGCATTGGCCTCGACTTGCCTCACTCTGAAAATCTCGAGCAAGAAAAAGGCCTCCTTTCAGCTGTTGTGCCCAGGCTTGTCAGGCCCATCAATAATGACTCCTCTCCCTCTTCTCCTCCACGCGATATTCTTCGCTTTGAGTGCCCCGAGACTATTAACAGGGATCGATTTTTCTGGTTCAGGGATGAGGAGTTTGCTAGACAGACTGTCGCTGGTCTCAACCCATTTAGCATCACATTGGTCACGGAATGGCCATTGAGGAGCAAACTTGATCCAGATATCTATGGTCCACAAGAATCAGCAATTACTTCAGAAATAATCGACAAAGAAATTGGAGGATTGCTTACTGCGGAACAGGCCGTAGAACAAAAGAAATTGTTCATTTTGGACTACCATGATTTATTGTTGCCGTACGTGAGCAAAGTACGAAAACTCAAAGGGACAACCTTATATGGATCGCGAACCTTATTCTTCCTGACTCCAGCAGGGACACTCAGACCTCTAGCAATTGAGTTGACAAGGCCACCCATGGATGGAAAAGGTCAATGGAAGCAAGTATTTACACCTGACTGGCACTCCACCGATGTATGGCTCTGGAGGCTTGCCAAAGCTCATGTTCTTGCTCACGACTCTGGTTATCATCAGCTTGTTAGTCACTGGTTAAGAACTCACTGTGTGACAGAGCCCTATATCATATCCACCAACCGACAACTTAGTGAAATGCATCCAATATATAGACTGCTTCATCCTCATTTTCGGTACACTTTGGAGATTAATGCTCTGGCTCGCGAGGCTCTTATTAATGCTGAGGGCACCATTGAAAGCTCCTTCTCCCCTGGAAAATACTCCATAGAGCTCAGCTCTGCCGCCTATGATCTTCAGTGGCGTTTTGATATGGAGTCCCTCCCTGCAGACCTCATTAGAAGGGGAATGGCCGTGGAAGATCCATTTCAACCACATGGGCTGAGGTTGACGATTCAAGACTACCCATTTGCCAATGATGGCCTTCTTTTATGGGATGCTATCAAACAATGGGTCACCGATTATGTTAACCATTACTACCCAGATCCGGTTTTGGTAGCAACAGATCAAGAGCTCCAATCATGGTGGACAGAGATTCGTACGGTAGGCCATGCAGACAAAAAGGAAGAACCGTGGTGGCCGCGTCTTCAAACCCCGAAAGACCTCATCGGAATCCTCAGCACAATCATATGGATAACTTCTGGACACCATGCTGCTGTGAACTTTGGCCAATACGCATATGGGGGTTACTTCCCAAATCGGCCAACGATTGCAAGGACAAAAATGCCCACGGAGGACCCTTCACCAAAAGAATGGGAAAAATTCATCAAAAAGCCCGAAAGAGAACTCTTAAAGTGCTTTCCTTCGCAACTTCAAGCAACTAGAGTAATGGCTGTGTTGGATATACTGTCAACTCATTCGCCAGATGAGGAATATATAGGGGAGAAGATGGAGCCATCATGGGGCGAAGATCCAGTGATAAAGGCAGCCTTTGAACGATTCAGAGAGAGACTGAAGAAACTTGAAGGAATTATTGATGAGAGGAACCGAAACAGTAAGCTAAAGAATAGGAATGGAGCAGGCATCCTCCCATACGAGCTGCTCAAGCCTTTCTCAAAGCCTGGGGTTACTGCCATGGGTGTTCCTTGTAGCATATCTATCTGA 2799 0.473 MMIKPRLLYQSHQANRRLSFQERTLALSLPIWSERSVRRQLGSQKVKAKKHQIFVPRSAQVSSPLVTHETTETDDSFKVKAIVNVKLAKAGFLSSLSLDRRIDDIIDLLGKSLLLELVSSQLDSETGEEKVTMEAYAHKGKRREEWVEYVADFQVPKDFGEVGAVLVENEHHHEMYVDTILLHGFPHQDPIPIHCASWVHSKFHNPTKRVFFTDKRLYRGKWRFGRNRSYIPSETPGGLKRYREEELRNLRGNGEGEMKSFERIYDFDVYNDIGDPDKSLHLQRPPLGGRQRPYPRRCRTGRPPSDADPVAEKRVGRFYVPRDECFSEVKELTFSTKTLHSVLLILLPTLGRVIRDKDLPFSYFHDIDSLFSIGLDLPHSENLEQEKGLLSAVVPRLVRPINNDSSPSSPPRDILRFECPETINRDRFFWFRDEEFARQTVAGLNPFSITLVTEWPLRSKLDPDIYGPQESAITSEIIDKEIGGLLTAEQAVEQKKLFILDYHDLLLPYVSKVRKLKGTTLYGSRTLFFLTPAGTLRPLAIELTRPPMDGKGQWKQVFTPDWHSTDVWLWRLAKAHVLAHDSGYHQLVSHWLRTHCVTEPYIISTNRQLSEMHPIYRLLHPHFRYTLEINALAREALINAEGTIESSFSPGKYSIELSSAAYDLQWRFDMESLPADLIRRGMAVEDPFQPHGLRLTIQDYPFANDGLLLWDAIKQWVTDYVNHYYPDPVLVATDQELQSWWTEIRTVGHADKKEEPWWPRLQTPKDLIGILSTIIWITSGHHAAVNFGQYAYGGYFPNRPTIARTKMPTEDPSPKEWEKFIKKPERELLKCFPSQLQATRVMAVLDILSTHSPDEEYIGEKMEPSWGEDPVIKAAFERFRERLKKLEGIIDERNRNSKLKNRNGAGILPYELLKPFSKPGVTAMGVPCSISI 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00085 932 PRINTS Plant lipoxygenase signature 845 859 IPR001246 GO:0016491
Accr13g00085 932 PRINTS Plant lipoxygenase signature 454 473 IPR001246 GO:0016491
Accr13g00085 932 PRINTS Plant lipoxygenase signature 183 201 IPR001246 GO:0016491
Accr13g00085 932 PRINTS Plant lipoxygenase signature 293 312 IPR001246 GO:0016491
Accr13g00085 932 PRINTS Plant lipoxygenase signature 415 431 IPR001246 GO:0016491
Accr13g00085 932 PRINTS Plant lipoxygenase signature 522 546 IPR001246 GO:0016491
Accr13g00085 932 SMART LH2_4 77 214 IPR001024 GO:0005515
Accr13g00085 932 Pfam PLAT/LH2 domain 116 212 IPR001024 GO:0005515
Accr13g00085 932 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 229 932 IPR013819 GO:0016702|GO:0046872
Accr13g00085 932 Coils Coil 876 896 - -
Accr13g00085 932 Gene3D - 564 931 - -
Accr13g00085 932 Pfam Lipoxygenase 238 915 IPR013819 GO:0016702|GO:0046872
Accr13g00085 932 Gene3D - 231 329 - -
Accr13g00085 932 PRINTS Lipoxygenase signature 605 625 IPR013819 GO:0016702|GO:0046872
Accr13g00085 932 PRINTS Lipoxygenase signature 567 584 IPR013819 GO:0016702|GO:0046872
Accr13g00085 932 PRINTS Lipoxygenase signature 585 602 IPR013819 GO:0016702|GO:0046872
Accr13g00085 932 FunFam Lipoxygenase 564 931 - -
Accr13g00085 932 FunFam Lipoxygenase 447 581 - -
Accr13g00085 932 ProSitePatterns Lipoxygenases iron-binding region signature 1. 585 599 IPR020833 GO:0016702|GO:0046872
Accr13g00085 932 ProSitePatterns Lipoxygenases iron-binding region signature 2. 612 622 IPR020834 GO:0016702|GO:0046872
Accr13g00085 932 PANTHER LIPOXYGENASE 78 932 IPR000907 GO:0016702|GO:0034440|GO:0046872
Accr13g00085 932 SUPERFAMILY Lipoxigenase 231 932 IPR036226 -
Accr13g00085 932 ProSiteProfiles PLAT domain profile. 92 213 IPR001024 GO:0005515
Accr13g00085 932 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 78 215 IPR036392 GO:0005515
Accr13g00085 932 Gene3D - 330 427 IPR027433 -
Accr13g00085 932 MobiDBLite consensus disorder prediction 280 309 - -
Accr13g00085 932 Gene3D - 429 561 - -
Accr13g00085 932 Gene3D PLAT/LH2 domain 35 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00085 Accr-Chr13 734998 743777 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g00085 155 932 Acyl Lipid Metabolism Gene Families AT3G45140 58.312 0.0 941
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00085 K00454 - gmx:100786646 1385.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g00085 13 734998 743777 Accr13g00085 13 734998 743777 ECH