Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00031 ATGAATAACAATGACCGCATCCACAGCAGGCAGGAAGAAGATCAAAGCAACGCAGATAGTACCGTCGCAAGCCATGACTCCAGATTCAACCAGACCCTCAGAAATGTTCAAGGCTTGCTGAAAGGTCGTAGCATCCCTGGTAAAATATTACTGACTCGAAGACTTGACCCGCTGGATAACTCAAACTCAAAGGAATATTCGCCAACATATGAAAGGAGCTTCTCCTTCAATGATGCTGGTACAAGTGATCACCCAGCTAAGGCTACAGAGGAAGAAGTCCAGAGTACAAGTAAACCAGCTAGTGTTGCCAATGTGAATAAGTTAAAAAAATCAAGTTCTGACAGGGACAACTCATCTGAAGAAGTCCAGAAATCTTTCATGGGTGCAAGAGCTACAGACTCTGCGAGAGTTATGAAGTTCACTAAGGTGCTTTCTGGGTCGACGGTAATATTAGAGAAGTTGCGTGAATTATCTTGGAGTGGAGTTCCAGATTACATGCGCCCTACAGTGTGGAGGCTTCTCTTGGGATATGCACCACCTAATTCAGATAGAAGGGAGGGTGTTCTGAGAAGGAAGCGCCTGGAGTATCTTGACTGCGTTTCTCAGTATTATGATATTCCTGATACACAGCGTTCAGATGATGAGATTAACATGCTTCGCCAGATTGCTGTTGATTGTCCAAGAACTGTACCTGATGTTTCATTCTTCCAGCAACCACAAGTTCAGAAATCATTGGAGCGCATTCTTTATACATGGGCCATTCGGCATCCTGCAAGTGGATATGTTCAGGGAATTAATGATCTTGTTACGCCATTTCTAGTTGTTTTCCTATCAGAATACTTAGAAGGGAGTATAGACAATTGGTCAATGTCTGATTTATCCGCAGATAAAATTTCTAATGTGGAGGCTGACTGTTATTGGTGCTTGTCAAAGTTACTTGATGGTATGCAAGACCATTACACATTCGCTCAACCTGGAATTCAGAGGCTTGTTTTTAAGTTGAAGGAATTGGTCAGAAGAATAGATGAGCCTGTTTCTAGACATGTGGAGGAACAAGGGCTGGAATTTCTTCAATTTGCTTTCCGCTGGTTCAACTGTCTTCTTATCCGTGAGATACCCTTCCATCTCATCACACGCCTTTGGGACACATATCTTGCTGAAGGAGATGCTTTACCAGATTTCCTTGTGTACATATTTGCCAGTTTTCTTCTGACGTGGTCAGATAAGCTCCAGAAGCTTGATTTCCAAGAGCTGGTAATGTTCCTTCAACACCTTCCAACTCAAAACTGGTCTCACCAAGAGCTTGAGATGGTGCTCTCTCGCGCTTTCATGTGGCACAGCATGTTCAACAACTCTCCCAGCCATTTAGCTAGCTAA 1377 0.4336 MNNNDRIHSRQEEDQSNADSTVASHDSRFNQTLRNVQGLLKGRSIPGKILLTRRLDPLDNSNSKEYSPTYERSFSFNDAGTSDHPAKATEEEVQSTSKPASVANVNKLKKSSSDRDNSSEEVQKSFMGARATDSARVMKFTKVLSGSTVILEKLRELSWSGVPDYMRPTVWRLLLGYAPPNSDRREGVLRRKRLEYLDCVSQYYDIPDTQRSDDEINMLRQIAVDCPRTVPDVSFFQQPQVQKSLERILYTWAIRHPASGYVQGINDLVTPFLVVFLSEYLEGSIDNWSMSDLSADKISNVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDEPVSRHVEEQGLEFLQFAFRWFNCLLIREIPFHLITRLWDTYLAEGDALPDFLVYIFASFLLTWSDKLQKLDFQELVMFLQHLPTQNWSHQELEMVLSRAFMWHSMFNNSPSHLAS 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00031 458 MobiDBLite consensus disorder prediction 1 15 - -
Accr13g00031 458 FunFam TBC domain containing protein 191 322 - -
Accr13g00031 458 MobiDBLite consensus disorder prediction 61 82 - -
Accr13g00031 458 Pfam Rab-GTPase-TBC domain 165 409 IPR000195 -
Accr13g00031 458 MobiDBLite consensus disorder prediction 1 29 - -
Accr13g00031 458 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 197 322 - -
Accr13g00031 458 FunFam TBC domain containing protein 323 458 - -
Accr13g00031 458 Gene3D - 323 458 - -
Accr13g00031 458 Gene3D - 138 189 - -
Accr13g00031 458 MobiDBLite consensus disorder prediction 58 126 - -
Accr13g00031 458 SMART tbc_4 158 414 IPR000195 -
Accr13g00031 458 ProSiteProfiles TBC/rab GAP domain profile. 161 388 IPR000195 -
Accr13g00031 458 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 113 431 - -
Accr13g00031 458 MobiDBLite consensus disorder prediction 92 108 - -
Accr13g00031 458 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 324 446 IPR035969 -
Accr13g00031 458 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 140 348 IPR035969 -
Accr13g00031 458 FunFam TBC1 domain family member 135 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g00031 Accr-Chr13 369682 375803 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00031 K20360 - qsu:112012707 806.594