Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g00024 ATGGCGACACTGACGATGATGACTGCGCTTCCTTCTCTCACAACTTACCGTTTCTTCCCCATTAGAAGAAGCTGGTGCAGTGATGTTATTGCGAGTCCAAATGGAAGAGGCATCTATTTTCACAACGTGCAGCTTGGTCCGTGGGGAAGCTTCAATCTCCCTAATCCTCGTTCGGTAACTCTCAAAAGCTCTAATACTGCAATTTTGGCTTTTAATTCAGGTTTAGAGGCATCAATCACAGACTCAAATGAAAACTCGGCAATCTTAGAAAATGCCAAAATGGTTGTAGAATCTGAAGATGGAAATAAGTTACAACTAAGGGTGGACTTGACTGGGGATCAAACACAAAGGGTTTTTAACCAGGTCCTTGCAAATTTAGCCCGCACTGCCCCTCCAATTCCAGGATTTCGAAGACAAAAAGGAGGAAAAACTTCCAAGGTTCCAACCAGCTTTCTTCTGCGGATGCTTGGCGAAGAACGCGTTACACGCTTTGTAATACAAGAAATACTCAATTCAACAATGGCTGATTATGTGAGAAAGGAAAACCTAGATGTGAAGGACCAGAATGTAAGAACCATTGAGACGGCAGACGAACTTAAAAAGTCATTCACGCCAGGAAATGAATTTGGATTTAGAGTTATAATCGAGCCTCAGACTTCATAA 663 0.4238 MATLTMMTALPSLTTYRFFPIRRSWCSDVIASPNGRGIYFHNVQLGPWGSFNLPNPRSVTLKSSNTAILAFNSGLEASITDSNENSAILENAKMVVESEDGNKLQLRVDLTGDQTQRVFNQVLANLARTAPPIPGFRRQKGGKTSKVPTSFLLRMLGEERVTRFVIQEILNSTMADYVRKENLDVKDQNVRTIETADELKKSFTPGNEFGFRVIIEPQTS 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g00024 220 Gene3D - 94 217 IPR036611 GO:0006457|GO:0015031
Accr13g00024 220 Pfam Bacterial trigger factor protein (TF) 94 211 IPR008881 GO:0006457|GO:0015031
Accr13g00024 220 SUPERFAMILY Trigger factor ribosome-binding domain 94 213 IPR036611 GO:0006457|GO:0015031
Accr13g00024 220 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 57 216 IPR005215 GO:0015031
Accr13g00024 220 FunFam Trigger factor 92 219 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g00024 - - pcin:129313385 364.77