Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01726 ATGACCAACCACAACAATAACCCTATCAGCATGATTGGCTTTCTCTTCATCAGCGTCCTCGTCCTCGCTGCATCTTCCGCCGAAAACTTCAACCAGGACTTCCAAATCACCTGGGGCGACGGCCGTGGCATGGTCCTCGACGACGGCTCCCTCCTCACCCTCTCTCTCGACAAGAGCTCCGGCTCCGGCTTCAGCTCAGTCAATGAATACCTCTTTGCAAAGATTGACATGCAGCTCAAGCTCGTGCCTGGCAACTCCGCCGGCACGGTCACCACTTACTATCTAAGTTCAGAGGGGTCAACTCATGATGAAATAGACTTTGAATTTCTAGGGAATTTGAGTGGTGATCCATATACTCTTCATACAAACATATATGCACTGGGAACCGGTAACAGAGAGCAGCAGTTTCACTTGTGGTTTGATCCCACCCTAGACTTTCACACTTATTCAATTCTCTGGAATCCTCTAACCATCATATTCTCAGTGGATGGGAGACCAATAAGGGAATACAAGAACATGGAATCAAGAGGCATTCCATTTCCAAAGAGCCAAGCAATGAGAATATACGGAAGCCTTTGGGATGCTGAGGATTGGGCCACCAGAGGAGGACTTGTCAAGACTGATTGGACCCAAGCTCCCTTCACCACCTCTTTCAGAGGCTTCACCGCCCAAGCCGGTGGCACCGGCGACCAGTCGTGGCTGAAACAGTCGGTGGACGCGGCGGGACAAGCAAGCATCAAGGAGGTTCAGGCCCAGTATATGATATATAACTATTGTACGGATACAACGCGATTCCCTCAGGGAGTCCCACCTGAATGCTCTCCCTGA 828 0.5048 MTNHNNNPISMIGFLFISVLVLAASSAENFNQDFQITWGDGRGMVLDDGSLLTLSLDKSSGSGFSSVNEYLFAKIDMQLKLVPGNSAGTVTTYYLSSEGSTHDEIDFEFLGNLSGDPYTLHTNIYALGTGNREQQFHLWFDPTLDFHTYSILWNPLTIIFSVDGRPIREYKNMESRGIPFPKSQAMRIYGSLWDAEDWATRGGLVKTDWTQAPFTTSFRGFTAQAGGTGDQSWLKQSVDAAGQASIKEVQAQYMIYNYCTDTTRFPQGVPPECSP 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01726 275 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 24 273 IPR044791 GO:0004553
Accr12g01726 275 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 274 IPR013320 -
Accr12g01726 275 ProSitePatterns Glycosyl hydrolases family 16 active sites. 104 114 IPR008263 GO:0004553|GO:0005975
Accr12g01726 275 Gene3D - 16 275 - -
Accr12g01726 275 Pfam Glycosyl hydrolases family 16 31 210 IPR000757 GO:0004553|GO:0005975
Accr12g01726 275 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 2 218 IPR000757 GO:0004553|GO:0005975
Accr12g01726 275 CDD GH16_XET 29 273 IPR016455 GO:0010411|GO:0016762|GO:0042546
Accr12g01726 275 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 230 273 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Accr12g01726 275 PIRSF EndGlu_transf 4 275 IPR016455 GO:0010411|GO:0016762|GO:0042546
Accr12g01726 275 FunFam Xyloglucan endotransglucosylase/hydrolase 17 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01726 Accr-Chr12 30504467 30506350 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01726 9 273 Glycoside Hydrolase AT4G25810 64.912 4.16e-134 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01726 K14504 - qsu:112034223 395.201