Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01326 ATGATGTTGTCTAAAATTGAAGCTGGTAAGAAGACAGGCGAAAGTTCGAGAGATGGGAAGCTGTTGAAAGAGATTGAAACTATTAGCAAGGCTTTGTATTTGGATAAAAGATATCCAAGGAATACAGTGTCTTCTGCTAATTCTCGATCCAAGTCTGCTGGGAAGGCTCACTTGCCTGATCCCAAATCGAAGCCTGCAGCTAGTAATGAAGATCCTTCACGCAAGGATAAGAGGTCCATATGGAATTGGAGACCGTTAAAGGCCTTTTCCCATATCCGCAATCAGAGGTTTGACTGTAGTTTTTCTCTCCAAGTCCATTTGATTGAAAAGTTGCCTTCAAATTTTAATGATGCTAGCCTTAGTGTATACTGGAAGAGGCGGGATGGGGTTTTGGTGACCCGCCCAGCCAAAGTAGTTGAAGGCGTGGCCAAATTTGAAGAGAAATTGACCTTCACTTGCTCAGTGTATGGTAGTAGGAGTGGACCTCACCACTCAGCTAAATATGAAGCTAAGCATTTTTTACTCTATGCTTCTATCACTAGTGCGCCAGAACTCGATCTGGGGAAGCATAGGGTTGACCTCACAAGGTTGCTTCCTCTTACACTGGAAGAGCTTGGGGAGGAGAAGAGCTCAGGGAAGTGGACTACAAGTTTTAGATTATCTGGAGTTGCCAGGGGTGCTGTAATGAATGTCAGTTTTGGGTATGAGGTGGTTGGTGATAACAGTAGCGCTACCAAGGACAACCATAATGTTCCTAATGCATTGACTACAAGGCGAAGTGTGCCAAGTTTTGCCAAGCAGTATTCTCCTCGAACTATAGATGAGGTAAAGGATCTTCATGAGGTCTTGCCCGCATCAAAGGCAGCACTGGCTAGCTCAATAGACGTTCTATATCAGAAATTTGATGAAGAAAAGACAAATAGTCCAGTGCATGACAAACCTGAACTGGATGAGTGCTCTGAGAATCTTGCGCTAATCAAACCAAATGAATCTCATTTGACTGATTCTGAGAAAGAAAAATCTGAAGATTGTGTTGGCGATGATGAAAAATGCAGCGCAGTCCCTGGCAATCCTGAAATTAATGCGTTTCAAGAAAAACTGGAGCCGGTCCAATCTGATGGTGATGTTAATGAAAACCCTGAAGGGTGCCAAGCTAGATTTTCTGTTGTTGATCAGGGCATAGAATCGTCATCAAAAGAACCTCTTAACTCAGAGGCATCTACCACAAAGGCTCCTGATTCTGATGTTGATACCCATGATACTGCTGGTGTCCAGTTACATTCTGATGCTGATACCCATGATACTGCTAGGATCCAGTTATCCTCTGAATATGCTATTACATGTGATCCCTTGGGTGAGGAAAATGATGATTCTAAGAAGGTTATGCCAAACAAATTCACTTGTGAAGACGATGATTTTATCACTAAAGAGCTGCTCATGCAAGAATTAGAATCGGCTTTAAATAGTATCTCTGATTTGGAGACAGCTGCACTTGAATCTCCCAAAGATGAGAAATATGTTGAAACCAGGTCTGAATATAAAATGAGCAAATCACATAGCTTGGATGATCTTACAGAGTCAGTTGCCAGTGAATTTTTAAGCCTGATAGGTGCTGACCATAGCCCATTTGGTTTGAGTTCTGAAAGCGAAGTTGAGTCCCCAAGAGAGCGTCTTTTAAGGCAATTCGAGAAGGAGGCTTTTGCTGAGGGTTTTTCCTTATTTGATTTTGAAATGGGTGATGATGAAGTTGACGGTGACTATAATGCTCCTGTTGGGTCTGAGCAGCGGAACTTCTCTGAGGGCCCCTCCAGGTCATCATCACTGTTACAAGATCTTCTGCAGGAGGAGCATCCAGTTGAGTCTCAGGAAGTGAGGAGCAAACAAAGGGCTCAGATGGTAGAAGACTTGGAAACAGAAGCCTTGATGCGTGAGTGGGGTTTGAACGAGGATGCCTTTAAGCATTCTCCACCGAAAGACCCTGCTGGTTTTGGAAGTCCGATTCACTCATCACCTGAAGAACCACTTACTTTGCCTCCTCTTGCAGAGGGGTTAGGTCCTTTTCTTCAGACAAAGGATGGGGGATTTTTACGAACTATGGATCCCTCGCTTTTCAGGAATGCCAAAAGTGGTGGAAGCTTGATTATGCAAGTATCCAATCCTGTAGTAGTACCTGCAGAAATGGGTTCTGGTGTAATGGAGATTTTGCAGCGTTTGGGTTCATTGGGAATTGAAAAGCTCTCAATGCAGGCAAATAAGTTAATGCCTTTGGAGGATATCACAGGAAAAACAATGCAGCAAGTGGCATGGGAAACTATGCCTCTCTTGGAGGGAACCGAAAGGCAATGTCTGTCGCAGCATGATTTGGTGGCAGGGCAAGATACTAGTTCTGTGCAAAGGGGCTTGAAAGGAACATCGTCAGGACCAAAGACTACAAAATCTGATGCAAGTTCATTAGACAATCAAACAAGTTCAGAATTCGCTTCATTGGAAGATCTTGCTCCATTGGCTATGGATAAAATTGAAGCGCTTTCAATGGAGGGTTTGAGAATACAGTCTGGGTTGTCTGATCAGGATGCACCATCAAACATCATTGCACAGTCCATCGGGGATGTTTCTGCTCTCCAGGGCAAGGGGGTTGATATTAGTGGGTCGCTTGGCCTTGATGGAGCTGCAGGCTTACAGTTGTTGGATCTAAAAGACGGCAGTGATGGTGTTGAATCTGTTGATGGGATAATGGGCCTATCATTAACCCTGGATGAATGGATGAGGTTGGATTCCGGTGAGATCGACGATGCAGAGAATATCAGTGATCATACTTCTAAACTTCTTGCCGCCCATCATGCTAACTCTTTTGAATTCATGCGTGGGGCCTCGAAGGGAGAAAAGAAGAGAGGCAAAGGCAGAAAGTGTGGTTTGTTGGGAAATAATTTCACATTAGCTTTAATGGTGCAACTGCGTGATCCTCTGCGAGACTATGAACCTGTTGGAACACCAATGCTCACTCTGATACAAGTTGAAAGGGTGTTTGTCCCACCAAAGCCAAGAATGTACTGCAATGTGTCAGAGATAAGGAACAATAATGACGAAGATGATGAGCGTGAAACTAGTGCTAAGTTGAAGTCAAAGGATGACAAGAAAGAAGAGAAAACCTCTGAAGAGGAGGGCATTCCTCAGTATAAGATAACTGAAGTCCATGTAGCTGGTCTGTCAACTGAACCCGAGCCTCGCAAAAAGAAGCTGTGGGGTACTTCAAGCAATGAAAAATCTGGCTCCCGTTGGTTACTTGCTAATGGAATGGGGAAGAGCAATAAGCATCCAATGATGAAGTCAAAAGTTGCACCTAAATCTGGTGTTTTAACTACCACAAAAGTGCAGCCTGGTGATACATTGTGGAGCATATCATCTCGTGTTTATGGTTCTGGATCAAAATGGAAGGAATTGGCAGCTGTAAATCCGCATATCAGAAACCCCAACGTCGTTATATCAGATAAAACCATTAGATTGAAGTGA 3510 0.437 MMLSKIEAGKKTGESSRDGKLLKEIETISKALYLDKRYPRNTVSSANSRSKSAGKAHLPDPKSKPAASNEDPSRKDKRSIWNWRPLKAFSHIRNQRFDCSFSLQVHLIEKLPSNFNDASLSVYWKRRDGVLVTRPAKVVEGVAKFEEKLTFTCSVYGSRSGPHHSAKYEAKHFLLYASITSAPELDLGKHRVDLTRLLPLTLEELGEEKSSGKWTTSFRLSGVARGAVMNVSFGYEVVGDNSSATKDNHNVPNALTTRRSVPSFAKQYSPRTIDEVKDLHEVLPASKAALASSIDVLYQKFDEEKTNSPVHDKPELDECSENLALIKPNESHLTDSEKEKSEDCVGDDEKCSAVPGNPEINAFQEKLEPVQSDGDVNENPEGCQARFSVVDQGIESSSKEPLNSEASTTKAPDSDVDTHDTAGVQLHSDADTHDTARIQLSSEYAITCDPLGEENDDSKKVMPNKFTCEDDDFITKELLMQELESALNSISDLETAALESPKDEKYVETRSEYKMSKSHSLDDLTESVASEFLSLIGADHSPFGLSSESEVESPRERLLRQFEKEAFAEGFSLFDFEMGDDEVDGDYNAPVGSEQRNFSEGPSRSSSLLQDLLQEEHPVESQEVRSKQRAQMVEDLETEALMREWGLNEDAFKHSPPKDPAGFGSPIHSSPEEPLTLPPLAEGLGPFLQTKDGGFLRTMDPSLFRNAKSGGSLIMQVSNPVVVPAEMGSGVMEILQRLGSLGIEKLSMQANKLMPLEDITGKTMQQVAWETMPLLEGTERQCLSQHDLVAGQDTSSVQRGLKGTSSGPKTTKSDASSLDNQTSSEFASLEDLAPLAMDKIEALSMEGLRIQSGLSDQDAPSNIIAQSIGDVSALQGKGVDISGSLGLDGAAGLQLLDLKDGSDGVESVDGIMGLSLTLDEWMRLDSGEIDDAENISDHTSKLLAAHHANSFEFMRGASKGEKKRGKGRKCGLLGNNFTLALMVQLRDPLRDYEPVGTPMLTLIQVERVFVPPKPRMYCNVSEIRNNNDEDDERETSAKLKSKDDKKEEKTSEEEGIPQYKITEVHVAGLSTEPEPRKKKLWGTSSNEKSGSRWLLANGMGKSNKHPMMKSKVAPKSGVLTTTKVQPGDTLWSISSRVYGSGSKWKELAAVNPHIRNPNVVISDKTIRLK 1169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01326 1169 MobiDBLite consensus disorder prediction 42 76 - -
Accr12g01326 1169 MobiDBLite consensus disorder prediction 1 20 - -
Accr12g01326 1169 MobiDBLite consensus disorder prediction 592 608 - -
Accr12g01326 1169 ProSiteProfiles LysM domain profile. 1120 1168 IPR018392 -
Accr12g01326 1169 MobiDBLite consensus disorder prediction 327 358 - -
Accr12g01326 1169 MobiDBLite consensus disorder prediction 1024 1059 - -
Accr12g01326 1169 ProSiteProfiles C2 NT-type domain profile. 89 237 IPR019448 -
Accr12g01326 1169 MobiDBLite consensus disorder prediction 584 608 - -
Accr12g01326 1169 MobiDBLite consensus disorder prediction 392 411 - -
Accr12g01326 1169 MobiDBLite consensus disorder prediction 331 349 - -
Accr12g01326 1169 Gene3D LysM domain 1111 1169 IPR036779 -
Accr12g01326 1169 SMART LysM_2 1121 1169 IPR018392 -
Accr12g01326 1169 MobiDBLite consensus disorder prediction 1022 1091 - -
Accr12g01326 1169 MobiDBLite consensus disorder prediction 392 432 - -
Accr12g01326 1169 MobiDBLite consensus disorder prediction 793 823 - -
Accr12g01326 1169 Pfam LysM domain 1123 1161 IPR018392 -
Accr12g01326 1169 Coils Coil 476 496 - -
Accr12g01326 1169 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 2 1162 IPR039614 -
Accr12g01326 1169 MobiDBLite consensus disorder prediction 412 432 - -
Accr12g01326 1169 CDD LysM 1123 1161 IPR018392 -
Accr12g01326 1169 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 94 240 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01326 Accr-Chr12 17245508 17249108 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01326 - - gmx:100815106 1414.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr12g01326 12 17245508 17249108 Accr12g01326 12 17245508 17249108 ECH