Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01316 ATGGGGGAAGAAGCCGTCATGGATGCTACTGAAGTGATCAGGCACCAAAATGGAAGCAGCAATCATCAAAGTCTTGAATTTGACATTTACCCTTTGAACGGCTACTACTTTGGCTCCACAAATGCTATTCCCTTCAAGGACGAGACCTTGGCTGATCGTATTCAGAGAAAGAAATCGAATTATGCTGCTCATGGGATACGAAATTGTGTGGAAGCAGTCATGCTGGTTGAGTTGTTCAAACATCCACATTTGTTATTGCTGCAAGAAAGAAATTCCATCTTTAAACTTCCTGGTGGCCGCCTAAGACCTGGTGAATCAGATATTGATGGATTGAAGCGTAAGCTGGCAAGTAAGCTTTATGTTGGTGAAAATGGGGATGGGGCTGAATGGGAGGTGGGTGAATGCCTTGGAATGTGGTGGAGACCTGATTTTGAAACCTTACTGTATCCCTACTTGCCACCTAATGTAAAGAGTCCAAAGGAGTGCACGAAACTCTACCTTGTGAAGCTACCAGGGTCACGAAAGTTCATTGTGCCTAAGAATCACAAGCTGCTTGCTGTTCCTTTGTGCCAAATTCCTGAAAATCACAAGACATATGGAACAATCATATCAGGTGTACCCCAGCTGCTGTCAAAATTTTCTTTCAACATGATCGGTCTTGAATGA 666 0.4354 MGEEAVMDATEVIRHQNGSSNHQSLEFDIYPLNGYYFGSTNAIPFKDETLADRIQRKKSNYAAHGIRNCVEAVMLVELFKHPHLLLLQERNSIFKLPGGRLRPGESDIDGLKRKLASKLYVGENGDGAEWEVGECLGMWWRPDFETLLYPYLPPNVKSPKECTKLYLVKLPGSRKFIVPKNHKLLAVPLCQIPENHKTYGTIISGVPQLLSKFSFNMIGLE 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01316 221 Pfam Nucleotide hydrolase 27 213 IPR016706 GO:0003729|GO:0005849|GO:0006378
Accr12g01316 221 PIRSF CPSF-25 3 220 IPR016706 GO:0003729|GO:0005849|GO:0006378
Accr12g01316 221 PANTHER PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT 22 218 IPR016706 GO:0003729|GO:0005849|GO:0006378
Accr12g01316 221 FunFam Pre-mRNA cleavage factor Im subunit 2 25 217 - -
Accr12g01316 221 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 26 217 - -
Accr12g01316 221 SUPERFAMILY Nudix 53 115 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01316 Accr-Chr12 17025090 17028716 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01316 K14397 - gmx:100791216 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr12g01316 12 17025090 17028716 Accr12g01316 12 17025090 17028716 ECH