Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01240 ATGATGTTTGAAAAGCAAGGAGTGCATGGTCTTCTTAACAATCATGTTCATGGTCAGCCATTAATGGCGACGAAGATGAAGAAGAAAAGTGATTATGATCGGAAATCAAAGGCAACGATGGTGCAGCAACAACAAAAGAAGCTTGGGATTGTCGATATCAGTGGCTTGTCCATAGACTCTCTTCCTAATCCTTCTCTTAATCTAGCCACCATCTCCAACTTAAACCTCTCCAACAATAATCTTCAGAGCATACCAGAGTCATTGACGGCGAGATTGCTGAACGTGGCAGTGCTGGACGTTCACTCAAATGAACTAACGTCGCTTCCAAACTCTATCGGCTGCCTCTCTAAGCTCAAGAGCTTGGACGTCTCCGGCAACCTCCTTGAGTCCTTACCCAAGACCATTGAGAATTGCAGAGCATTAGAAGAACTGAATGCCAACTTCAATAAGCTAACCAAGCTCCCAGAAACCATAGGCTTTGAGCTCGTCAACCTCAAGAAGCTATCAGTGAACGCTAACAAGCTTGTGTTCCTTCCTCACTCCACCTCCCACCTCACCGAACTCCGTGTTCTTGACGTTCACCTGAATTGCCTCCGATCCCTACCAGACGACTTCGAGAATCTCATCAACCTCAAAACCCTAAATGTGAGCCAAAACTTCCAATACCTAGAAACCCTACCTTACTCAGTAGGGCTCCTCTTGTCCCTCGTAGAACTCGACGTCAGCTACAACAGAATCAAGTCCTTGCCGGAGTCCATCGGTTGCCTCAAGAGGTTAGAGAAGCTAAGAGTCGAAGGGAATCCCCTGACATCGCCGCCGAAGGAGGTGGTGAAGCAAGGGGTTGACAAAGTGAAGGAATATTTGTGTCACAAGTTGAACTCGATGCATGAGAGTCCAAAGAAGAAATCTTGGGTGGGTAAGTTGGTTAGGTGTGGAACAATAAACAGACGATGTACGAGGAATAATAATGGTCATACAGATCATGATTTTGCTCTTGGACCTCAGTATCGTACTATGGAAGGTATTGGATCACCAAGGTTAATGGCCATGTTCTCTCCAAAGCGTCTCTTTTCACCTCGTCGTTCCGTGTAA 1092 0.4606 MMFEKQGVHGLLNNHVHGQPLMATKMKKKSDYDRKSKATMVQQQQKKLGIVDISGLSIDSLPNPSLNLATISNLNLSNNNLQSIPESLTARLLNVAVLDVHSNELTSLPNSIGCLSKLKSLDVSGNLLESLPKTIENCRALEELNANFNKLTKLPETIGFELVNLKKLSVNANKLVFLPHSTSHLTELRVLDVHLNCLRSLPDDFENLINLKTLNVSQNFQYLETLPYSVGLLLSLVELDVSYNRIKSLPESIGCLKRLEKLRVEGNPLTSPPKEVVKQGVDKVKEYLCHKLNSMHESPKKKSWVGKLVRCGTINRRCTRNNNGHTDHDFALGPQYRTMEGIGSPRLMAMFSPKRLFSPRRSV 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01240 363 ProSiteProfiles Leucine-rich repeat profile. 70 91 IPR001611 GO:0005515
Accr12g01240 363 Gene3D Ribonuclease Inhibitor 13 222 IPR032675 -
Accr12g01240 363 SUPERFAMILY L domain-like 47 274 - -
Accr12g01240 363 PANTHER - 47 291 - -
Accr12g01240 363 SMART LRR_typ_2 256 279 IPR003591 -
Accr12g01240 363 SMART LRR_typ_2 185 207 IPR003591 -
Accr12g01240 363 SMART LRR_typ_2 92 114 IPR003591 -
Accr12g01240 363 SMART LRR_typ_2 162 184 IPR003591 -
Accr12g01240 363 SMART LRR_typ_2 139 161 IPR003591 -
Accr12g01240 363 SMART LRR_typ_2 233 255 IPR003591 -
Accr12g01240 363 SMART LRR_typ_2 115 138 IPR003591 -
Accr12g01240 363 SMART LRR_typ_2 68 91 IPR003591 -
Accr12g01240 363 Pfam Leucine rich repeat 71 128 IPR001611 GO:0005515
Accr12g01240 363 Pfam Leucine rich repeat 164 219 IPR001611 GO:0005515
Accr12g01240 363 SMART LRR_bac_2 162 181 - -
Accr12g01240 363 SMART LRR_bac_2 115 134 - -
Accr12g01240 363 SMART LRR_bac_2 68 87 - -
Accr12g01240 363 SMART LRR_bac_2 256 275 - -
Accr12g01240 363 SMART LRR_bac_2 233 252 - -
Accr12g01240 363 SMART LRR_bac_2 92 111 - -
Accr12g01240 363 SMART LRR_bac_2 208 229 - -
Accr12g01240 363 SMART LRR_bac_2 138 157 - -
Accr12g01240 363 Gene3D Ribonuclease Inhibitor 223 287 IPR032675 -
Accr12g01240 363 ProSiteProfiles Leucine-rich repeat profile. 235 256 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01240 Accr-Chr12 14787283 14792605 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g01240 58 303 Receptor kinase-like Gene Family AT5G65710 28.112 7.51e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01240 - - pcin:129319689 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr12g01240 12 14787283 14792605 Accr12g01240 12 14787283 14792605 ECH