Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01227 ATGCGCTCAGGAGGTTGTGCATTACAGCAGACCCTCACATCGGAGGCTGCAACTGTGTTAAAACATTCTCTGGGCTTGGCTCGCCGAAGGGGCCATGCCCAGGTCACTCCGCTCCACGTGGCAGCCACCTTGCTCAGTCTTAGAGCCAGTTCCTTCAGAAGGGCTTGTCTCAAATCTCACCCTCATCACCAAACTTCTCAACATAATTCACAATTTCCTCTCCATTGTAGAGCCCTTGAGCTCTGTTTCAATGTGGCTCTCAATAGGCTGCCAACCACACCAACTCCAAATCTGCTTCACACCCATCACCAACCTTCTCTTTCAAATGCTCTCATTGCTGCTCTCAAAAGAGCTCAGGCTCACCAGAGAAGGGGTTGCATAGAACAACAGAATCAGCAGCCACTCCTGACCGTAAAAGTAGAGCTTGAACAGCTTGTTATCTCTATTCTTGATGACCCTAGTGTTAGCAGGGTTATGAGAGAGGCTGGGTTTTCTAGTACTGCTGTGAAGAGCAGTATAGAGGACTGTTCAGTTTCACCTCCATGTTCTGTTTTCCAGTGTTACAGTACTTCTGGAGGTGTCTTTTCTTCTCCCTGTTCTCCTTCTCCTAGTGAAAACCAGAGGGAAACCATCAATCCCAACAGTTTCAGGCACGCTCACTTCTACACTACTGCTCCTGAGCACTACAGCACAGTTCTTTTCTCTCCTCAAAAGAGAACCCCAGTGTACCCTATCACTGAACCAGCTTTATCTAAGGGAGATATCAACTTGATTTTGCATGTTCTCTTGAGGAATAAGAAGAGGAATGCTGTGATAGTTGGGGATTCTGTGTCCATCACTGAAGGCCTTGTGGGAGAGTTGATGGGAAGGTTAGACAAAGGAGAGGTTCCTGATGAGTTGAAGTCCGCAAGTTTCATCAAGTTTCATCTAGCACCAGTTTCATTGAGGTCCATGAAGAGAGATGAAGTTGAAATGAACCTCTTGGAGCTGAAAAGAAAGGTGGATTCTGCTGCATCAGGAGGAGGTGGTGGTGCCATTATTTACATTGGAGATCTGAAATGGACAGTGGAGGAAACTTTCTTCAGTGAAAAAGAGGAGGGAAAAGAAGCATCTGGATATAATCCAGTGGATCATGTAATTGCAGAAATAGGTAAGTTGTTCTCTGACCATGGAAGCTCATCAAACGCTAAGGTATGGCTCATGGCAACTGCAAGTTACCAAACATACATGAGATGTCAAATGAGGCAGCCTCCTCTTGAAACCCAGTGGTCCTTTCAGGCAGTTCTTGTTCCGTCAGGTGGACTTGGCTTAAGCCTCCATGCTTCCAGTGTTCTTGAGTCAAAAGTGACTATTTCCCAGAACTCAACTCATATGCTGGAAAAGAAACTCTTTAATAATAAGGAGGAGCAGGATAAGCTCACTTGCTGTGAAGAATGTGCCTCTAACTATGAAAAGGATGCTCAAATGTTCAAGCCAAGCCACACCAAATTCTTGCCTTCCTGGCTTCAGTCTCATAGCATTGAGGCCCATCAGAAGGAGGAATTAACCCAGTTGAGAAGAAAATGGAATAGACTATGCCAGTTTCTTCACCAAAGCAAGCATTCCCAGAACCACTGGAACAACAGTGAATACAGCAATTACAGTTCCAATGGGAAGATTTATCCCTATAATTCTTCATATCCCACGTGGTCAAAGCAAGGAAGTATTTTCCCAGATTCAAGTTGTATATCATTTGCAGAATCTGCGGCTAAATCCACTCACAGCTCTAATCTAGTACCCCGATTCCAACGCCAACAATCATGCACTATTGAGTTCAATTTTAGCAATGGAACTCAGAAACAGCAGCAAGCAACAGCTGAAGAACCGAGCTTGAAATCTCTTAAGGGCATGGAAAGTAAAGAAGTAAAGATTACTCTTGCTCTTGGGAATTCCCAATTCGGAGGTTCAGAGCAAAGGGAGGAAAATATAACTGATACAACAACACAGAGAAGGGCTCATGTTTGTAAACTACTGCAGGAGAATGTGCCGTGGCAATCTGAAACAATTCCTTCAATAGCAGAGGCTTTGCTTGTTGATTCCCAATCAAAAAGGCAAAACCCAACTTCGTTGATTTTGAAAGGCAATGACTCGGTAGGGAAAATAAGATTGGCTCGTGCAATTGCTGAATCGTTCTTTGGTTCAGATGATCTGCTTCTTCAATTGGACATGAAGAAGGAGACCTTAGAATCTCCATCATCTGAAGTGCTAAGGAGAGCTTTGGAAGCTCATGAAGAACTCGTCGTCTTAATCGAGAACATTAATTTCGCTGACACCGATTTCAAGAAATTCCTCGGAGACATTTATGAAACAGGAAAGTTCGGCCAGGCAATATTCATAGTCACGACCGGTGGCTCAACGATGAACGAAGAACAGAATCAGGACTCAGTGGTGCAATTGACATTGCAGGTCAGCGAAACCAATCCAAACTTGGAGACACATTGCATTGTGGGCAAAAAGCGAAAAGCAGAATTCGATCTGTTCGCCAAAATAAAAAACCCTAGAACCGAAGACAAGGAAGTTGAATCTAACAGCAAGAAAGGCGTCCCGAGACAGTCAAGCTTCAACACCCTTGATCTGAACATGAAAGCCAATGAAGAAGACGAAGACGGAGACGGCGGGAGTAGCGGGAGCCCGATTTCAAGCGATTTGACCCGCGAAACCATGCCGGATTCTACAAACCCGAATTGGTTTTTGGACTCAATCAAGAACCAATTCGAGTTCAATCGAAGTCCAGCTCGAGACAGAGAAATGGCAGAGCTATTCGCAGGGAAAATCAAAGGGTGCTTTGAAGAACTTCACGGGAAGCAAAATGTGAGGAATTTCAGCATAGACGAGAAGGTGATAGAGGAAGTAGTTGGTGGGTGTGGTAGTTTTACTAACAGAGTGTTTGAGAAATGGCTAAAAGACATTTTTCAAAGAAGCTTAGAAACAGGAAAGGAGAAAGAGGGTATAGGTTTTAGACTTTGTTGCGATGGAAATGGTAAAGGTAAAGAAGGTAAAGGGGGGGAAATTAGGGTTTTCGATAGTGGAGAAGGTGGGTTCATGAGTTCATGTCTGCCAAAGAGTATCAAAGTTAACTACTTGATGGATTGA 3132 0.4422 MRSGGCALQQTLTSEAATVLKHSLGLARRRGHAQVTPLHVAATLLSLRASSFRRACLKSHPHHQTSQHNSQFPLHCRALELCFNVALNRLPTTPTPNLLHTHHQPSLSNALIAALKRAQAHQRRGCIEQQNQQPLLTVKVELEQLVISILDDPSVSRVMREAGFSSTAVKSSIEDCSVSPPCSVFQCYSTSGGVFSSPCSPSPSENQRETINPNSFRHAHFYTTAPEHYSTVLFSPQKRTPVYPITEPALSKGDINLILHVLLRNKKRNAVIVGDSVSITEGLVGELMGRLDKGEVPDELKSASFIKFHLAPVSLRSMKRDEVEMNLLELKRKVDSAASGGGGGAIIYIGDLKWTVEETFFSEKEEGKEASGYNPVDHVIAEIGKLFSDHGSSSNAKVWLMATASYQTYMRCQMRQPPLETQWSFQAVLVPSGGLGLSLHASSVLESKVTISQNSTHMLEKKLFNNKEEQDKLTCCEECASNYEKDAQMFKPSHTKFLPSWLQSHSIEAHQKEELTQLRRKWNRLCQFLHQSKHSQNHWNNSEYSNYSSNGKIYPYNSSYPTWSKQGSIFPDSSCISFAESAAKSTHSSNLVPRFQRQQSCTIEFNFSNGTQKQQQATAEEPSLKSLKGMESKEVKITLALGNSQFGGSEQREENITDTTTQRRAHVCKLLQENVPWQSETIPSIAEALLVDSQSKRQNPTSLILKGNDSVGKIRLARAIAESFFGSDDLLLQLDMKKETLESPSSEVLRRALEAHEELVVLIENINFADTDFKKFLGDIYETGKFGQAIFIVTTGGSTMNEEQNQDSVVQLTLQVSETNPNLETHCIVGKKRKAEFDLFAKIKNPRTEDKEVESNSKKGVPRQSSFNTLDLNMKANEEDEDGDGGSSGSPISSDLTRETMPDSTNPNWFLDSIKNQFEFNRSPARDREMAELFAGKIKGCFEELHGKQNVRNFSIDEKVIEEVVGGCGSFTNRVFEKWLKDIFQRSLETGKEKEGIGFRLCCDGNGKGKEGKGGEIRVFDSGEGGFMSSCLPKSIKVNYLMD 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01227 1043 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 992 - -
Accr12g01227 1043 ProSiteProfiles Clp repeat (R) domain profile. 8 181 IPR004176 -
Accr12g01227 1043 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 666 966 IPR027417 -
Accr12g01227 1043 Pfam Clp amino terminal domain, pathogenicity island component 140 175 IPR004176 -
Accr12g01227 1043 Pfam Clp amino terminal domain, pathogenicity island component 26 46 IPR004176 -
Accr12g01227 1043 SUPERFAMILY Double Clp-N motif 12 174 IPR036628 -
Accr12g01227 1043 Gene3D - 246 432 IPR027417 -
Accr12g01227 1043 MobiDBLite consensus disorder prediction 859 873 - -
Accr12g01227 1043 Gene3D - 648 846 IPR027417 -
Accr12g01227 1043 MobiDBLite consensus disorder prediction 848 908 - -
Accr12g01227 1043 Gene3D - 9 178 IPR036628 -
Accr12g01227 1043 FunFam protein SUPPRESSOR OF MAX2 1 9 179 - -
Accr12g01227 1043 MobiDBLite consensus disorder prediction 887 908 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01227 Accr-Chr12 14434324 14437921 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01227 - - gmx:102660146 1197.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr12g01227 12 14434324 14437921 Accr12g01227 12 14434324 14437921 ECH