Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g01024 ATGGATGTGGGGAGAAGAAGAGGTGGTGGTGGGGCTTTTAGAAGTAGTGTGGTGCCGGGCTCGGTGTGGGAGAGCAGGATGAAGATTGACGAAGTAAGAGGTGGGATTAAGGTCTTTACTGGAGAAGAAAGTCCTGAAGAAGATGGAGGAGGGGATGGTAGGACCAGATTGAGAAGAATCCCAAACGGGAAGAGGAAAACCTGGAAATCGGAGAGCTCTGGGGGTTTTGATAGGAACCTAATTCATGTAGCTCGACGAAGATCATCACTAGAGCCACTCAAGAATTCCGATGAACTCAGCAACAAGGGGCTTAGTGTTTCTTTAGATGGAATTAATAAGAGCCCTATTCTTGCCAGGAAAATTTCTTCATCCGCCGAGAGAAAGCTAAGATCTGAATCTGCTGAGGAACCTGAAACGAATTCGAAGCTGCTCAACAAGTCGAAATCAGAATCTATTAATCAAAATGTTGATAAAGTCGACGGGCCAGGAAACGGAAATGCGGAGAATTCAATTCAATCGAGGAAGGAGAAATTACTATCGGACGAAGTTCTTGATGAATCTAGCAAGGATTTAGGTTTGTGCCAAGAAAAGGCTATTTCGAGCCGTTCAGAAAATGTAGGTATGGTAAAAGACCCTCCTGAATCGTCGGTGGAAGTTGGTGGCGATATATTTGTTGATTTTGACGACGAAGCAAATGAAAGAGTTGAAGTAGATAATGAGATTAAGATGGAGAAGGAGAATGTGAAGGAAATCAGAGTTTCAGAGCTTAAGGCTGTGAATGAACCACAACACAAGAAGGTTCTGATCCAAAGGCGATTTCAACATGATGAAAGGCCTGTGTCAATCCTTCGAACATCGAGACAATCTTCCCCTATTAAAAGGCATTCAACAATTTACCACAATTTCAGAAAATCTCATTCAATTCCAAAGGCTGAGAAGTACCACAGCTTTCCACAAACCCAGAACAAATTGCAGAGTCTAGTGGATTTAATCATGTGGAGAGAGGTCTCAAAATCAGCATTTGTCTTTGGAATTGGAACATTCATCATAGTCTTATCTTCTTATGCAATGGATATCAATGTGAGCTCTATTTCTGTGATGTCCTATCTGGGCCTTGCTCATCTGGCTGTCATCTTCCTCTACAGATCCTTCATTTGCAGGGGAGTAAGGAATTTTGATCGCACAAACCATGTTTTGGGAGAGGAAGAAGCAATTTGGGTAATAAAACTGATTCTGCCTTACTTGAACGAGTTCCTGTTAATACTCAGAGCCCTCTTTTCTGGTGATCCTGGTACCACTATGATGATGGCAGTTTTGCTGTTTGTTTTAGCCAGATGGGGCTGCTCTATAACTATTTGGAAGATGGCCAAATTCGGCTTCTTTGTTGCTTTCATGGCGCCAAAGCTTTACTCTGTCTATTCTGCACAGTTAACTTCATACGCGAATGCCTGGGCGAAGCGAGTGAGGGAAGGTTGGGATTCATGTAGTCACAAGAAAGCAGTGTGTATTGGCATCTTTGGCCTTGTGTGGAATCTGTCATCGGTCATTGTTCGCATTTGGGCAGCTTGA 1569 0.4315 MDVGRRRGGGGAFRSSVVPGSVWESRMKIDEVRGGIKVFTGEESPEEDGGGDGRTRLRRIPNGKRKTWKSESSGGFDRNLIHVARRRSSLEPLKNSDELSNKGLSVSLDGINKSPILARKISSSAERKLRSESAEEPETNSKLLNKSKSESINQNVDKVDGPGNGNAENSIQSRKEKLLSDEVLDESSKDLGLCQEKAISSRSENVGMVKDPPESSVEVGGDIFVDFDDEANERVEVDNEIKMEKENVKEIRVSELKAVNEPQHKKVLIQRRFQHDERPVSILRTSRQSSPIKRHSTIYHNFRKSHSIPKAEKYHSFPQTQNKLQSLVDLIMWREVSKSAFVFGIGTFIIVLSSYAMDINVSSISVMSYLGLAHLAVIFLYRSFICRGVRNFDRTNHVLGEEEAIWVIKLILPYLNEFLLILRALFSGDPGTTMMMAVLLFVLARWGCSITIWKMAKFGFFVAFMAPKLYSVYSAQLTSYANAWAKRVREGWDSCSHKKAVCIGIFGLVWNLSSVIVRIWAA 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g01024 522 PANTHER RETICULON-LIKE PROTEIN B17 1 522 IPR044647 -
Accr12g01024 522 Pfam Reticulon 328 482 IPR003388 -
Accr12g01024 522 MobiDBLite consensus disorder prediction 39 75 - -
Accr12g01024 522 MobiDBLite consensus disorder prediction 123 174 - -
Accr12g01024 522 ProSiteProfiles Reticulon domain profile. 327 490 IPR003388 -
Accr12g01024 522 MobiDBLite consensus disorder prediction 123 143 - -
Accr12g01024 522 MobiDBLite consensus disorder prediction 39 72 - -
Accr12g01024 522 MobiDBLite consensus disorder prediction 144 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g01024 Accr-Chr12 10799568 10803720 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g01024 K20720 - gmx:100785568 514.612