Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00979 ATGTCAGCCACCTCGCTCTCTTCATTACACTCCTCTCCTGTCACTCCCTCTCTCTCCTTGTCCTTGCTCTCTCCCGCCTTGTCTTCCTCTGATCAATGTCTTTCTCTCCCTCGGCTCTCCCTCCAGACTCAACGTCTCCGCTCACCCAACCTCTTCCGCGTTACCCACTTGAGAACAAACCCAAAACCCAAGGGTCTGAAACTGAATTGTTCGATGAACGAGCCATTGAAGGTCATGATATCTGGTGCACCTGCTTCGGGCAAGGGAACTCAATGTGAATTGATTGTCCAGAAGTTTGGATTAGTGCACATATCAACTGGGGATTTGTTAAGAGCTGAAGTAGCAGCTGGGTCCGAAATTGGAAATAAAGCAAAGGAGTATATGAATGCTGGTCGCTTGGTTCCAGATGAAATTGTGACTGCTATGGTGACAGCAAGATTATCTCGTGAAGATGCAAAACAAAAAGGGTGGCTTCTTGATGGGTACCCTCGGAGTTTCGCCCAAGCAGAGGCTCTGGAACAAAAGCAGATTAGACCAGATATCTATATTGTATTAGATGTTCCTGATGATATTCTGATCGACAGATGTGTTGGGAGAAGGCTAGATCCAGTGACAGGGAAGATTTATCATATTAAAAATTTTCCACCAGAGACTGAAGAAATCAAATCAAGGCTTATCACCCGTCCTGACGACACTGAAGAAAAAGTTCAGTCCCGGCTGGAAATATATAAGCAAAATGCAGAAGCTGTTTCTTCCACTTACTCAAGCATAACAAATAAGATCGATGGAAATCGCTCAAAGGAAGTAGTTTTTGAAGAAATTGACTCTCTGTTATCACAAGTGCATAATGAAAAGGGGAAATTAATAAAACCAGAAAAGTCGGTGCCTGATATAAAGATGGGGAAGGAATCATTAAGCCAGGATAAGTGGAGAGGAATTCCTACTAGACTAAATAACATTCCCCATTCCAGAGAGATCAGGAAATATTTCTATGATGATGTACTGCAAGCCACAGAGAGGGCTATAAGAGATGGAAAAAATCGGTTGAAGGTGGACATCAACATTCCTGAGCTGAACCCGGAAATGGATGTTTATCGAATTGGTACTTTGATGGAACTTGTTCGAGCTCTTGCCCTTTCATTTGCTGATGATGGGAAATGTGTGAAGGTTTGTGTGCAAGGGTCAATGGGAGAAGGTGCTCTTGCTGGAATGCCACTGCAGCTGGCTGGAACTCGAAAGATCTTAGAGTTTATGGATTGGGGCGATTATGGTGCAAAAGGGACCTTTATCAAGATTGGTTCCATAGGTGCTGCAGAGGTTGATGAGCAAGATGACATGTATATCTTGGTGGCTCCTCAAAATGCTGTGGGAAATTGTATTATTGATGATCTAAGAGCAATGACCAATGCTGCTAAACAAAGGCCAGTTATCCTAATCAATGCTAGGCTCAAGGATTTGCCGGGTTCCAGTGGTATAATGCAAACAATGGGACGAGAGCAAAGACTTGAGTATGCAGCATCATTTGAAAGTTGCTACTTCTTTCGGCTTCTCTATTATGCAGGAACTCAGTATCCCATAATGGGAGCTATCAGGATGTCTTATCCATTTCCGTACGAGCTTTACAAGAGGGTGGATGAATCATTGGGAAAGGAGAAATATGTTATCTTGTCAACATTTCCTCAAAGGCCTACTACTGATGAAATTAATAATGCCTTCGAAGGAAAACCAAGGACTGAAACTAGGAAAGCCTCTGGGATTTGGGGTTTCTTGAGTGGCATTCTTTGA 1785 0.4319 MSATSLSSLHSSPVTPSLSLSLLSPALSSSDQCLSLPRLSLQTQRLRSPNLFRVTHLRTNPKPKGLKLNCSMNEPLKVMISGAPASGKGTQCELIVQKFGLVHISTGDLLRAEVAAGSEIGNKAKEYMNAGRLVPDEIVTAMVTARLSREDAKQKGWLLDGYPRSFAQAEALEQKQIRPDIYIVLDVPDDILIDRCVGRRLDPVTGKIYHIKNFPPETEEIKSRLITRPDDTEEKVQSRLEIYKQNAEAVSSTYSSITNKIDGNRSKEVVFEEIDSLLSQVHNEKGKLIKPEKSVPDIKMGKESLSQDKWRGIPTRLNNIPHSREIRKYFYDDVLQATERAIRDGKNRLKVDINIPELNPEMDVYRIGTLMELVRALALSFADDGKCVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFIKIGSIGAAEVDEQDDMYILVAPQNAVGNCIIDDLRAMTNAAKQRPVILINARLKDLPGSSGIMQTMGREQRLEYAASFESCYFFRLLYYAGTQYPIMGAIRMSYPFPYELYKRVDESLGKEKYVILSTFPQRPTTDEINNAFEGKPRTETRKASGIWGFLSGIL 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00979 594 SUPERFAMILY Microbial and mitochondrial ADK, insert "zinc finger" domain 198 227 IPR036193 GO:0004017
Accr12g00979 594 CDD ADK 77 270 IPR000850 GO:0005524|GO:0006139|GO:0019205
Accr12g00979 594 Gene3D - 72 290 IPR027417 -
Accr12g00979 594 NCBIfam adenylate kinase 77 278 IPR006259 GO:0004017|GO:0005524|GO:0016776
Accr12g00979 594 Hamap Adenylate kinase [adk]. 76 279 IPR000850 GO:0005524|GO:0006139|GO:0019205
Accr12g00979 594 ProSitePatterns Adenylate kinase signature. 157 168 IPR033690 -
Accr12g00979 594 PANTHER NUCLEOTIDE KINASE 67 276 IPR000850 GO:0005524|GO:0006139|GO:0019205
Accr12g00979 594 FunFam Adenylate kinase, chloroplastic 72 283 - -
Accr12g00979 594 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 282 IPR027417 -
Accr12g00979 594 Pfam Domain of unknown function (DUF1995) 327 569 IPR018962 -
Accr12g00979 594 Pfam Adenylate kinase 80 256 - -
Accr12g00979 594 PRINTS Adenylate kinase signature 79 92 IPR000850 GO:0005524|GO:0006139|GO:0019205
Accr12g00979 594 PRINTS Adenylate kinase signature 157 173 IPR000850 GO:0005524|GO:0006139|GO:0019205
Accr12g00979 594 PRINTS Adenylate kinase signature 228 243 IPR000850 GO:0005524|GO:0006139|GO:0019205
Accr12g00979 594 PRINTS Adenylate kinase signature 107 121 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00979 Accr-Chr12 10301024 10306452 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00979 K00939 - gmx:100818830 928.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr12g00979 12 10301024 10306452 Accr12g00979 12 10301024 10306452 ECH