Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00919 ATGGCGGGAAACGACTGGATAAACAGCTACTTGGAGGCGATACTGGATGTCGGACCTGGCCTCGATGACGCCAAATCCTCTCTACTACTCAGAGAGAGAGGTAGATTCAGTCCCACCCGCTACTTCGTTGCCGAGGTCATTTCTGGTTTCGATGAGACCGATCTCTACCGCTCTTGGGTTCGGGCTTCAGCTACGAGGAGTCCCCAGGAGAGGAATACTAGATTGGAGAATATGTGTTGGAGGATTTGGAACTTGGCTCGGCAAAAGAAGCAGCTTGAGAACGAGGAAGCACAAAGATTGAATAAACGTCATCTTGAACGTGAAAGAGGCCGCAGAGAAGCAACTGCTGATATGTCAGAGGACTTATCAGAGGGAGAAAAAGGAGATCCAGTGGGTGATGTTTCAGCTCATGGCGATAGTACAAGAGGAAGACTTCCTAGAATCAGTTCTGCTGATGCTATGGAGACATGGGCTAACAGTCAAAAGGGGAAGAAACTTTATATTGTACTCATAAGCATTCATGGTCTAATAAGAGGTGAGAATATGGAGCTGGGGCGGGATTCTGATACTGGTGGTCAGGTTAAGTATGTTGTGGAACTTGCAAGGGCCTTGGGCTCAATGCCAGGAGTTTATAGAGTTGATTTGCTAACCAGACAAGTGTCATCACCGGATGTGGATTGGAGTTATGGGGAGCCAATAGAAATGTTGACTCCAAGAAACCAAGATGATTTAACAGATGAAAGGGGAGAGAGCAGTGGTTCTTATATAATTCGCATACCCTTTGGTCCAAGGGATAAATACATTCCCAAAGAACATCTCTGGCCTTACATTCCTGAATTTGTTGACGGTGCTCTTGGCCACATCATACAGATGTCAAAAGCTCTTGGGGAGCAAATTGGTGGTGGGCATGCTGTCTGGCCTGTCGCCATTCATGGACATTATGCAGATGCAGGGGACTCTGCTGCTCTTCTATCTGGTTCTTTAAATGTTCCAATGCTTTTCACTGGCCACTCCCTTGGTAGGGATAAGTTAGAACAGCTTCTGAAGCAAGGCCGGCTATCAAGGGATGAAATAAATTCAACATACAAGATTATGCGTCGGATAGAAGCTGAGGAATTAGCCCTTGATGCTTCTGAAATAGTCATAACAAGCACTAGACAGGAAATAGAACAACAATGGCGTTTGTATGATGGCTTTGATCCCGTAGTGGAGCGCAAAATACGAGCAAGGATCAGACGTAATGTGAGTTGTTATGGTAGATTCATGCCTCGTATGGCGATCATTGCACCCGGTATGGAGTTCCATCACATAATTCCACATGATATAGAAAATGAACCAGACGGAAATTTGGATCATCCTGCCCCCCAAGATCCACCTATTTGGTCTGAGATAATGCGGTTCTTTACCAACCCCCGCAAGCCAATGATCCTTGCCCTTGCTAGACCAGACCCCAAAAAGAACATCACAACTTTGGTGAAAGCATTTGGAGAATGCCGTCCCCTACGAGAACTTGCAAATCTGACTTTAATTATGGGTAACAGAGATGGCATTGATGAAATGTCGAGCACAAGTGCCTCTGTTCTTCTCTCAGTAATTAAGCTGATTGACAAGTATGATTTGTATGGGCAAGTGGCATATCCAAAACACCACAAACAATATGAAGTCCCTGACATCTATCGTCTAGCTGCAAAGACAAAGGGTGTTTTTATCAATCCAGCTTTTATTGAGCCATTTGGTCTTACCTTGATTGAGGCAGCTGCTTATGGTTTGCCAATTGTTGCAACGAAAAATGGAGGTCCTGTTGATATTCATAGGGTACTTGACAACGGTCTCCTTGTGGATCCCCATGATCAGCAGTCTATTTCAGATGCTCTTTTGAAGCTTGTTAGCAACAAGCAATTATGGGCAAAATGTAGACAGAATGGGTTGAAGAATATTCATCTTTTCTCATGGCCTGAGCATTGCAAGACTTATCTGTCTAAAATAGCCACTTGCAAACCAAGATATCCGCAATGGCTGCGAAATGATGATGCAGCTGAAAGTTCTGAATCGGAATCACCAGGTGATTCCTTGAGAGATATACATGATTTATCTCTAAACCTGAAGTTTTCATTGGATGGAGAGAAGAGTGGAGGTAGTGGAAATGACAATTCCATGGAGTCTGAAGGAAATACAGCTGAGAGAAACACTAAACTGGAGAATGCTGTGTTGTCATGGTCAAAGGGCATCTCCAAGGATACACGGAAAGGTGGAGCTACAGAAAAATCAGATCAAAATACAAATGCTGGTAAATTTCCACCACTGAGGAGGAGGAAGCGTCTGTTTGTCATTGCAGTGGACTGTGATACTACTAAAGGTCTTCTTGAAACCATTAAAGTGATATTTGAGTCCGCAGAAAAGGAAAGGGCTGAAGGCTCTGTTGGGTTCATTTTGGCAACATCCTTCACAATATCTGAGATACACTCATTTTTGGTCTCGAGTGGCTTGAGCCCTGATGATTTTGATGCTTATATTTGCAACAGTGGCAGTGATCTTTACTATCCATCCCTCACTTCTGAAGATCGTGCCTTTGTGGTTGACTTGTATTATCACTCACACATTGAATACCGTTGGGGTGGGGAAGGGCTGAGGAAGACCTTGGTACGATGGGCAGCATCAATAACTGATAAGAAGGATGAGGTTGAGGAGCAAATTGTGCTTCCTTCTGAGCAGCTTTCTACTGACTATTGTTATGCTTTCAAGCTGCAAAAGCAGGGAAAGGTTCCCCCTTTGAAGGAGCTGCGGAAGCTTCTGAGAATCCAGGCTCTACGTTGTCATGTTATTTATTGTCAAAATGGCACAAGAATGAACGTTATTCCAGTGCTGGCATCTCGTTCCCAAGCCCTCAGGTACCTCTATGTTCGATGGGGTTTTGAACTGTCGAAGATGGTGGTGTTTGTGGGAGAATGCGGCGAGACTGATTACGAGGGATTGCTTGGCGGTCAACACAGAAGTGTTATACTGAAGGGAGTTGGTAGTAGCGCAATCAGCCAACTCCATAACAACAGAAGCTATCCTCTATCAGATGTCATTGCACTGGACAACCCCAACATTGCTGAGGCTAGTGATGGTAGCAACGGTGCCGACATCCGATCCCTGATAGAAAACGCAGGATTTCTCAAGGACTGA 3168 0.447 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVAEVISGFDETDLYRSWVRASATRSPQERNTRLENMCWRIWNLARQKKQLENEEAQRLNKRHLERERGRREATADMSEDLSEGEKGDPVGDVSAHGDSTRGRLPRISSADAMETWANSQKGKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPIEMLTPRNQDDLTDERGESSGSYIIRIPFGPRDKYIPKEHLWPYIPEFVDGALGHIIQMSKALGEQIGGGHAVWPVAIHGHYADAGDSAALLSGSLNVPMLFTGHSLGRDKLEQLLKQGRLSRDEINSTYKIMRRIEAEELALDASEIVITSTRQEIEQQWRLYDGFDPVVERKIRARIRRNVSCYGRFMPRMAIIAPGMEFHHIIPHDIENEPDGNLDHPAPQDPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVIKLIDKYDLYGQVAYPKHHKQYEVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSISDALLKLVSNKQLWAKCRQNGLKNIHLFSWPEHCKTYLSKIATCKPRYPQWLRNDDAAESSESESPGDSLRDIHDLSLNLKFSLDGEKSGGSGNDNSMESEGNTAERNTKLENAVLSWSKGISKDTRKGGATEKSDQNTNAGKFPPLRRRKRLFVIAVDCDTTKGLLETIKVIFESAEKERAEGSVGFILATSFTISEIHSFLVSSGLSPDDFDAYICNSGSDLYYPSLTSEDRAFVVDLYYHSHIEYRWGGEGLRKTLVRWAASITDKKDEVEEQIVLPSEQLSTDYCYAFKLQKQGKVPPLKELRKLLRIQALRCHVIYCQNGTRMNVIPVLASRSQALRYLYVRWGFELSKMVVFVGECGETDYEGLLGGQHRSVILKGVGSSAISQLHNNRSYPLSDVIALDNPNIAEASDGSNGADIRSLIENAGFLKD 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00919 1055 CDD GT4_sucrose_synthase 167 660 - -
Accr12g00919 1055 Pfam Sucrose synthase 251 436 IPR000368 GO:0005985|GO:0016157
Accr12g00919 1055 Pfam Sucrose-6F-phosphate phosphohydrolase 775 1003 IPR006380 -
Accr12g00919 1055 MobiDBLite consensus disorder prediction 93 133 - -
Accr12g00919 1055 Coils Coil 75 107 - -
Accr12g00919 1055 Gene3D - 871 954 - -
Accr12g00919 1055 FunFam Sucrose-phosphate synthase 1 432 650 - -
Accr12g00919 1055 MobiDBLite consensus disorder prediction 705 730 - -
Accr12g00919 1055 Gene3D Glycogen Phosphorylase B; 432 650 - -
Accr12g00919 1055 PANTHER SUCROSE-PHOSPHATE SYNTHASE 3-RELATED 1 1049 - -
Accr12g00919 1055 MobiDBLite consensus disorder prediction 93 145 - -
Accr12g00919 1055 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 182 660 - -
Accr12g00919 1055 NCBIfam sucrose-phosphate synthase 1 1049 IPR012819 GO:0005985|GO:0046524
Accr12g00919 1055 MobiDBLite consensus disorder prediction 710 730 - -
Accr12g00919 1055 CDD HAD_SPS 774 1004 IPR035659 -
Accr12g00919 1055 Gene3D - 807 1001 IPR023214 -
Accr12g00919 1055 Gene3D Glycogen Phosphorylase B; 168 662 - -
Accr12g00919 1055 MobiDBLite consensus disorder prediction 744 765 - -
Accr12g00919 1055 Pfam Glycosyl transferases group 1 469 643 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00919 Accr-Chr12 9436011 9441943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00919 1 1042 Glycosyltransferase AT5G20280 76.099 0.0 1635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00919 K00696 - gmx:100127429 1903.26