Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00915 ATGTCGGGAGGCACGCAGAATAGTCTAAGAAAAGCTCTTGGAGCCCTCAAGGACACGACAACGGTTTCATTGGCTAAAGTCAACAGTGATTACAAGGAATTGGACATTGCTATAGTGAGAGCAACAAATCATGTGGAGCGTCCATCAAATGAGAAACATATAAGAGCTATTTTTTCTGCGATCTCTGCTACTAGGCCTCGGGCTGATGTTGCTTACTGCATCCATGCTCTTGCAAGACGATTGTCAAAGACACATAACTGGGCGGTTGCATTAAAAACTTTAATTGTTATTCACCGTGCTCTAAGGGAAGTGGATCCCACATTCCATGAGGAGCTGATAAATTATGGCAGAAGCAGAAGTCATATGCTCAACATGTCTCATTTCAAAGATGATTCCAGTCCAAATGCATGGGATTATTCAGGATGGGTCCGCACTTATGCATTGTTTTTGGAGGAAAGACTGGAATGTTTTCGTGTATTGAAATATGACATTGAGACAGATCGTCCAAGGACTAAAGATTTGGACACTGCGGAGCTGTTGGAGCAGTTGCCAGCATTACAGGAACTTCTGTTTCGAGTTCTTTGTTGTCAGCCAGAGGGAGCAGCTGTGAATAACTTTGTCATTCAGCTAGCACTCTCAATGGTTGCTTCAGAAAGCATTAAAATTTATCAAGCTATCAGTGACGGCACTATCAATCTGGTTGATAAGTTTTTTGAGATGCAACGCTCTGATGCTTTGAGAGCTCTGGATATATACAGGAGGGCTGGGAAGCAGGCAGAGAGGCTGTCTGAGTTTTATGAAATTTGTCGAAACCTCGATATTGGACGAGGAGAGAAATTTGTTAAAATTGAGCAGCCCCCTGCATCATTTCTACAAGCCATGGAAGAGTATGTCAAAGATGCTCCCCGTGATTCAATAGTCCGCAAGGATCAGGCTACTGACAACAAAATTGCCTCTCCAAAAGAAGTTTTGGCTATAGAATACAATAAGACATCAGAGGTGCAGGAGGCACCTGCAGTGCCTGTGCAGGAGTCACCTCCACCTCCACCTCCTCAACCTGTAAAAGTGGAAGCACCTGCAGCACAACCACCGCCTGATTTGTTGAATTTGGACGATCCTGTTCCAGCTGCTTCAGAGTTGGACGATAAGAATGCCTTGGCATTAGCCATTGTTCCTGTTGCTGATCAGCCAACTTCTGTTTCAAAACAAGAAAATGGAACTACAGGCTGGGAATTGGCACTTGTTACAGCTCCAAGTTCTAATGAGAGTGCTTCAGCAGCTAGCAAACTGGCGGGAGGGTTAGACAAGCTTACGCTAGACAGCCTATACGATGATGCAGTCAGAAGGAACAACCAGAACGTGAGCTATAATCCATGGGAACCAGCTCCTATGGGAACCATGATGCAACCGACAATGCGTGATCCATTTTTTGCTTCTAATGCAGTTGCTGCTCCACCTTCTGTCCAGATGGCTGCTATGTCCAACCAGCAGCAGGCTTTCATGTTTCATCAGCAGCAGCAGCAGCAGCAAATGATGATGATGGCCCCTCAGCAGCCATCTGCTAATCCTTTTGGAAATCCTTATGGAGCCACTGTCCACCCCTATGGCTCAGGTATGCCTGTTCAAGCGTACAATCCATACACCCATTTCATCTAG 1656 0.4541 MSGGTQNSLRKALGALKDTTTVSLAKVNSDYKELDIAIVRATNHVERPSNEKHIRAIFSAISATRPRADVAYCIHALARRLSKTHNWAVALKTLIVIHRALREVDPTFHEELINYGRSRSHMLNMSHFKDDSSPNAWDYSGWVRTYALFLEERLECFRVLKYDIETDRPRTKDLDTAELLEQLPALQELLFRVLCCQPEGAAVNNFVIQLALSMVASESIKIYQAISDGTINLVDKFFEMQRSDALRALDIYRRAGKQAERLSEFYEICRNLDIGRGEKFVKIEQPPASFLQAMEEYVKDAPRDSIVRKDQATDNKIASPKEVLAIEYNKTSEVQEAPAVPVQESPPPPPPQPVKVEAPAAQPPPDLLNLDDPVPAASELDDKNALALAIVPVADQPTSVSKQENGTTGWELALVTAPSSNESASAASKLAGGLDKLTLDSLYDDAVRRNNQNVSYNPWEPAPMGTMMQPTMRDPFFASNAVAAPPSVQMAAMSNQQQAFMFHQQQQQQQMMMMAPQQPSANPFGNPYGATVHPYGSGMPVQAYNPYTHFI 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00915 551 Pfam ANTH domain 33 300 IPR011417 GO:0005543
Accr12g00915 551 PANTHER CLATHRIN ASSEMBLY PROTEIN 9 501 IPR045192 GO:0048268|GO:0072583
Accr12g00915 551 FunFam putative clathrin assembly protein At5g35200 166 318 - -
Accr12g00915 551 MobiDBLite consensus disorder prediction 336 364 - -
Accr12g00915 551 Gene3D ANTH domain 165 314 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Accr12g00915 551 FunFam Clathrin assembly protein AP180 8 164 - -
Accr12g00915 551 ProSiteProfiles ENTH domain profile. 26 164 IPR013809 -
Accr12g00915 551 SUPERFAMILY GAT-like domain 169 300 - -
Accr12g00915 551 SUPERFAMILY ENTH/VHS domain 33 165 IPR008942 -
Accr12g00915 551 CDD ANTH_N 34 157 - -
Accr12g00915 551 Gene3D - 7 164 IPR008942 -
Accr12g00915 551 MobiDBLite consensus disorder prediction 341 364 - -
Accr12g00915 551 SMART enth_2 32 164 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00915 Accr-Chr12 9376440 9380598 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00915 K20043 - gmx:100815239 853.588