Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00859 ATGGGGTTTATCGGAGATACTGCCAATTCCTTCAAGTCCATTCAACTCAGACCAGCTCTGACCCAGCTCATCAATCTTGGCTTGATTGTGTCATCTGCTCTAATGATATGGAAAGGATTAATGTGTATAACTGGCACTGAATCACCAGTAATTGTTGTAATTTCTGGAAGCATGGAGCCTGGTTTCCAGAGAGGTGACATTTTGTTTTTGCAAATGAGCAAGGATCCCATTCGCGCTGGAGAGATTGTTGTTTACAATATTGACGGACGTGATATTCCAATTGTTCATCGAGTAATAGAGGTTCATGAACGTCAAGATTCTGGAGAAGCTTATATCCTCACCAAAGGGGACAATAACCCTGGCGATGACAGGGGTTTGTACAATGGTCTTCATTCGCTGCAGAAACATCATATAATGGGCAGAGCGGTTGGGTTCTTACCTTATTTTGGTTGGGTGACAATAATAATGTCCGAAAAGCCTGTATTGAAGTACATATTAATCGGGGCGTTGGGGTTGCTGGTGATAATATCAAAAGATTAA 540 0.4185 MGFIGDTANSFKSIQLRPALTQLINLGLIVSSALMIWKGLMCITGTESPVIVVISGSMEPGFQRGDILFLQMSKDPIRAGEIVVYNIDGRDIPIVHRVIEVHERQDSGEAYILTKGDNNPGDDRGLYNGLHSLQKHHIMGRAVGFLPYFGWVTIIMSEKPVLKYILIGALGLLVIISKD 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00859 179 ProSitePatterns Signal peptidases I signature 3. 112 125 IPR019758 GO:0004252|GO:0016020
Accr12g00859 179 NCBIfam signal peptidase I 28 175 IPR001733 GO:0006465|GO:0008233|GO:0016020
Accr12g00859 179 CDD S26_SPase_I 49 142 IPR019533 GO:0004252|GO:0006465
Accr12g00859 179 Pfam Peptidase S24-like 37 143 IPR015927 -
Accr12g00859 179 PANTHER SIGNAL PEPTIDASE COMPLEX CATALYTIC SUBUNIT SEC11 15 178 IPR001733 GO:0006465|GO:0008233|GO:0016020
Accr12g00859 179 FunFam Signal peptidase complex catalytic subunit SEC11 49 152 - -
Accr12g00859 179 Gene3D Umud Fragment, subunit A 48 155 - -
Accr12g00859 179 SUPERFAMILY LexA/Signal peptidase 35 145 IPR036286 -
Accr12g00859 179 PRINTS Eukaryotic signal peptidase (S26B) family signature 112 123 IPR001733 GO:0006465|GO:0008233|GO:0016020
Accr12g00859 179 PRINTS Eukaryotic signal peptidase (S26B) family signature 53 68 IPR001733 GO:0006465|GO:0008233|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00859 Accr-Chr12 8618603 8623355 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00859 K13280 - ming:122071921 278.87