Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00845 ATGGCGATCTCCAGTTCATCATCTGATTGTAATGGGAACAAAAGTGACTGCTGCGCAACTGTGGTGTTGAACGTCTACGATCTCACTCCTCTTAACAACTACACTCATTGGATTGGATTCGGAATCTTCCACTCCGGCATTGAAGTATATGGCAGAGAGTTTGGGTTTGGAGCTCATGAATTGTCGTCAAGTGGAGTTTTTGAAGTGGAGCCAAGAAAGTGCCCTGGATTTATATATAGACGTTCCATCACTTTGGGCCAAATAAATATGCATCCTTCAGAGTTCCAGACGTTTATTGAAAATATGGCTTCAGAGTATTATGGGGATACCTATCACCTTATCTCTAAGAATTGCAATCATTTTACAGATGATCTCTCCCGTAGATTGACAGGAAAGCGGATCCCTGGTTGGGTGAATCGTCTTGCCAATCTAGGTGCTCTGTGTAGCTGCCTGCTTCCTGAAAGCCTTCAAGTATCTAATGTCAAACAACAAATGCCTGAATGGCACGTCAATATGGATGACAGCGATCAAGAGACAGATGATGATCAAGAAATAAATGGCAACGAAGAAGAGAAGCACCTTCTTTCGCAGTTGCCTGGATATGAAGATGTTTCTTATGTTAAAGAGGTCCAAGCAAAATAA 642 0.4221 MAISSSSSDCNGNKSDCCATVVLNVYDLTPLNNYTHWIGFGIFHSGIEVYGREFGFGAHELSSSGVFEVEPRKCPGFIYRRSITLGQINMHPSEFQTFIENMASEYYGDTYHLISKNCNHFTDDLSRRLTGKRIPGWVNRLANLGALCSCLLPESLQVSNVKQQMPEWHVNMDDSDQETDDDQEINGNEEEKHLLSQLPGYEDVSYVKEVQAK 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00845 213 Pfam PPPDE putative peptidase domain 20 153 IPR008580 GO:0008233
Accr12g00845 213 Gene3D PPPDE domains 15 176 IPR042266 -
Accr12g00845 213 MobiDBLite consensus disorder prediction 172 194 - -
Accr12g00845 213 ProSiteProfiles PPPDE domain profile. 19 156 IPR008580 GO:0008233
Accr12g00845 213 SMART DUF862_2a 19 157 IPR008580 GO:0008233
Accr12g00845 213 PANTHER DESUMOYLATING ISOPEPTIDASE 20 178 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00845 Accr-Chr12 8500863 8503856 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00845 - K22763 egr:104436652 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr12g00845 12 8500863 8503856 Accr12g00845 12 8500863 8503856 ECH