Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00827 ATGGAAGATCATCAGAATTCAACGCCAAATGCTATTGGCCTCTGTCTCCTCCCATCTGAGCTTATGCAGAACATCTTTCTATCCCTTGTTTTGCCCGAAATCATTAGCTTGAAGCTGGTCAGCAAATCGTTTTCCGACATCATCTCCGATCAGAGCTTCGTCCGTGAGTGTAACTCACGGTCCAGCTCCACTGCGTGGCTCTTCGTCTACAAGAAACGGTGGCTCCGTGACGCCGTCCTCCACGGTTTCACCGACCGATCCGACCGGTGGTTCCGGATCCCGATTACGGAGCTCCTGAAGCCCATCCATTTCCACTCGGAAGATCTCTACTTCCTGACGGCCTCCGGGAACGTCTTCCTCTTCGCCTCCAACACCGTGAGGGAAGTTATTGCGGTTAATCTAGTCAACATGACCGTAAACAGAATCCCTCCCAGCCCCTTGGGCCCACGCGGCACCTCCTCCTGGCGAAGATCGGGCATGAAGCTCGTGACCGGTCCGCCTGGGTCGGCCCATTTCAGATTCATATTCGCAGAATTCGTGAACAACCGCCCGGTCCTCTTCGTGTACAACTCCATCACTGATTCATGGAAGTCTCTCGAAGCAGAAGAAGAAGGCACAACAAACAGAGGCCACACTTGGACACGAGAAGAAGGCAACGAACGGATATTCCTGAACGTGATCAACGGTCGGAGAGAGAGCGTGCTGGTGGCGTGCCGACGGGATTGCGATGCTGCGGTGGTGGTCCGGCCGAGACTTGAGAGGAGAGGCGGCGAGGGGGAGAGAGACGGAGAGATGAGGGTAGGATTCAGCTGGGGGAACGTGATAGATAGGCTGCACGTGTACGGTGATGGGTTCATGATGATAGTGGAATCGGAGGGTGGAGGGAGAGATGGGAAGAAGAGGGTTTTAAAGGGTATAGAGATGTGGGGTGTGAAGAAGGGGAGGGGAGGGAGTGACACGTGGGAGTTCATATCACAGGCTCCGATGGATGTGATGAAGAAGATGGAGAGGGTGTATGGGGTTATGATGGGGTGCTTGGAGCAGAGGAATGGAGTTTTAAGGGCGTGTTTGGTTACCAATTGGGAAGGACTCTGGGACATCATGTGGATTTCTTTCCATCCAAACACGAATCACTGGTCATGGATTCCTCTGCCTGACTGTAAAATGAAAGGCTTTAACTTGGCTGGTATCAGCTTTTCCTCTGGCCTCACCTTGCCTTAG 1221 0.5332 MEDHQNSTPNAIGLCLLPSELMQNIFLSLVLPEIISLKLVSKSFSDIISDQSFVRECNSRSSSTAWLFVYKKRWLRDAVLHGFTDRSDRWFRIPITELLKPIHFHSEDLYFLTASGNVFLFASNTVREVIAVNLVNMTVNRIPPSPLGPRGTSSWRRSGMKLVTGPPGSAHFRFIFAEFVNNRPVLFVYNSITDSWKSLEAEEEGTTNRGHTWTREEGNERIFLNVINGRRESVLVACRRDCDAAVVVRPRLERRGGEGERDGEMRVGFSWGNVIDRLHVYGDGFMMIVESEGGGRDGKKRVLKGIEMWGVKKGRGGSDTWEFISQAPMDVMKKMERVYGVMMGCLEQRNGVLRACLVTNWEGLWDIMWISFHPNTNHWSWIPLPDCKMKGFNLAGISFSSGLTLP 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00827 406 ProSiteProfiles F-box domain profile. 11 57 IPR001810 GO:0005515
Accr12g00827 406 Gene3D - 6 78 - -
Accr12g00827 406 Pfam F-box domain 16 55 IPR001810 GO:0005515
Accr12g00827 406 SUPERFAMILY F-box domain 14 63 IPR036047 GO:0005515
Accr12g00827 406 SMART fbox_2 17 57 IPR001810 GO:0005515
Accr12g00827 406 PANTHER BNACNNG10540D PROTEIN 16 200 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00827 - - qsa:O6P43_002320 527.324