Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00820 ATGTTCAAGCAAATTCTTAGCAGATTGCCTAAGAGGGTTCCAAAATCCGACCCATCAGATACTTCACAGAGTGATACTGAGAATTCTACGAGTTTTGGGAATATCTTTCAATGTACAAATGTTGGGACTGCCATTTCAAGCAAATTAAATGTTGTGAAGCGGGTATCTTCAGTGGTTTTCCCTGCAAGCACGGGTGCCTGTGTGGAAGCAATTGACCCCCATCTTTCCTTCAAAGATGTTTCAAATGCACAGAAGCAAAACCTGTTTATCAATAAGTTGAGCTTTTGCTGCAGTGTTTATGATATGAGTTATCCTGATAGGAACTGCTCGGAGCTAGATCTTAAGCGTCAAACACTCGTAGATCTTGTTGATTTTGTTTCTTCTGGATCTGCAAAGTTTACAGAACCAGCGATTTCTGCCATGTGCAAAATGTGTGCAAGCAATTTGTTCAGGGTTTTCCCACCCAAGTTTCGTTCTAGTTCTACAGGTGGTGAAACAGCTGATGAAGAACCAATCTTTGATCCTGCCTGGTCCCACCTGCAAGTTGTTTACGACCTCCTCCTTCAATTTATCAATTACGACTCTCTGGATGTTAAATTGGCAAAAATGTATATTGACCATGCCTTCATTTTGAGACTACTGGACCTTTTTGATTCTGAGGACCCTAGAGAAAGAGACTCCTTGAAAGCAATTCTGCATAGGATCTATGGGAAATTTTTGGCACACAGGTTTTTTATACGGAAATCAGTTAGCAACATTATCTACAGGTTCGTTTTTGAGACTGAACGGCATAATGGAATTGCTGAGCTGTTGGAGATATTTGGGAGCATAATTAGTGGATTTGCCTTGCCATTGAAGGAGGAGCACAGAACATTTCTGTGGAGGGCTTTAATTCCCCTGCACAAACCCAAGTCCGTTGGTATTTATCATCAGCAATTAACGTACTGCGTTGTACAGTTCATGGATAAGGATCCAAAACTGGCTAGCCCTGTGATGAAGGGCCTATTGAAGTATTGGCCTGTCTCAAATAGTCCAAAGGAGTTAATGTTCTTGAGTGAATTGGAAGAGGTATTGGAAATGACTAGCATGGTGGAATTCCAGAAGATTATGGTCCCACTATTTAGACGCATAGGCGGTTGCCTTAACAGTTCCCATTATCAGGTGGCTGAACGCACCCATTTGTTATGGAACAATGAACACATCCTTAATCTTATCACGCACAATCGGCAGGTGATTCTGCCTCTGATCTTCTCAGCTCTTGTACATAATACCCAGAACCACTGGAACCAAGCAGTACTCAACCAGACTAAGAACATCAGGAAGATGCTCTCTCAGATGGATGAGGATCTGGTACTGGCCTGCCAACATAACTTGGAGGAGGAAGACTTGAAGTTGAGCGCTGAAGCCGAGAGGCGAAGAAAAGTGTGGGAACGCCTGGAAGCTGCGGTTAATGTTGAATCTGTAGTTGATGACATTTTAGTTCCTGTTAAATCTGCTGCATCTGCATGCTCTGTGTCTGTGGCCTGCTAA 1530 0.4281 MFKQILSRLPKRVPKSDPSDTSQSDTENSTSFGNIFQCTNVGTAISSKLNVVKRVSSVVFPASTGACVEAIDPHLSFKDVSNAQKQNLFINKLSFCCSVYDMSYPDRNCSELDLKRQTLVDLVDFVSSGSAKFTEPAISAMCKMCASNLFRVFPPKFRSSSTGGETADEEPIFDPAWSHLQVVYDLLLQFINYDSLDVKLAKMYIDHAFILRLLDLFDSEDPRERDSLKAILHRIYGKFLAHRFFIRKSVSNIIYRFVFETERHNGIAELLEIFGSIISGFALPLKEEHRTFLWRALIPLHKPKSVGIYHQQLTYCVVQFMDKDPKLASPVMKGLLKYWPVSNSPKELMFLSELEEVLEMTSMVEFQKIMVPLFRRIGGCLNSSHYQVAERTHLLWNNEHILNLITHNRQVILPLIFSALVHNTQNHWNQAVLNQTKNIRKMLSQMDEDLVLACQHNLEEEDLKLSAEAERRRKVWERLEAAVNVESVVDDILVPVKSAASACSVSVAC 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00820 509 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 76 481 IPR002554 GO:0000159|GO:0007165|GO:0019888
Accr12g00820 509 MobiDBLite consensus disorder prediction 1 29 - -
Accr12g00820 509 Gene3D - 82 482 IPR011989 -
Accr12g00820 509 SUPERFAMILY ARM repeat 86 463 IPR016024 -
Accr12g00820 509 FunFam Phosphoprotein phosphatase, putative 82 480 - -
Accr12g00820 509 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 484 IPR002554 GO:0000159|GO:0007165|GO:0019888
Accr12g00820 509 PIRSF PP2A_B56 4 503 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00820 Accr-Chr12 8234951 8236836 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00820 K11584 - gmx:100814349 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr12g00820 12 8234951 8236836 Accr12g00820 12 8234951 8236836 ECH