Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00819 ATGGTGGCAACAGCTGCTGCATCTTCGTTCTTCCCTGTTACTTCACCCTCACCAGACTCCGGTGCGAAGACTACCAAACTTGGTGGTGGGTTCAGAGGACTTAAATCCAAATCTAGAACTTCTTGTGGCTTGCAAGTTAAGGCATCAAAGATAAATGGAGTTACTGCATCTTTGGGAGGCATGAAACATGAAAATGATACCCCTTCGTCCTCCTCAAGGACTTTTATCAATATGTTGCCTGATTGGAGCGTGCTTCTAGCTGCCATCACAACTTTTTTCTTCGCAGCAGCTGAGAAGCAGTGGATGATGCTTGATTGGAAGCCAAAGCGTCCTGACATGCTTATGGATCCATTTGGTATAGGAAAGATTGTTCACGATGGTCTTGTGTTTCAGGAAAGTTTTCCAATTAGGTCCTATGAAATAGGTGCTGATCGAACAGCATCTATTGAGACGTTACTGAATCATTTGCAGGAAACTGCCCTTAATCATGTTAAGAAATCAAGGCTTCTCGGCGATGGCTTTGGTTCCACTCCAGAGATGTGTAAAAAGAACTTGATATGGGTGGTTGCTCGGATGCAGGTTGTGGTTGATCGTTATCCTACGTGGGGTGATGTTGTTCAAGTACACACTTGGGTTTCTGCTTCGGGGAAGAATGGCATGCGTCGTGATTGGGTTGTGAGTGACAGCGAAACTGGTGAAATATTGACAAGAGCCTCCAGTGTTTGGGTCATGATGAATAAACTGACAAGGCGGATATCTAAAATGCCAGAAGAAGTTAGGGGAGAGATAGAGCCCTACTTTTTGAACCTTGCTCCTGTTGTGGAAGAGGAAAACGGAAAACTACCTAAACTTGATGACGACACAGCAGATTATAAGCGTACAGGCTTGAGTCCTCGGTGGAGTGACTTGGATGTCAACCAGCATGTTAACAATGTGAAGTACATTGGCTGGATCCTGGAGAGTGCTCCACAGTCAATTCTGGAGAGCCACGAGCTTTGTGCCATGACTCTGGAGTACCGGAGGGAGTGTAAGAGGGACAGTGTGCTGCAGTCACTGACAGCTGTCTCTAGCGCCGATGTGGGTAATTTAGCTCAAAGCGGAGGTGTAGAGTGCAAGCATTTGCTTAGGTTCGAAGATGGTGCTGAGATTGTGAAAGGTCGGACAGAGTGGAGGCCGAAACACCTCCACAACCTGGGTGCCAACAATCATTTTCCAGCAGAAAGCACCTAG 1230 0.4659 MVATAAASSFFPVTSPSPDSGAKTTKLGGGFRGLKSKSRTSCGLQVKASKINGVTASLGGMKHENDTPSSSSRTFINMLPDWSVLLAAITTFFFAAAEKQWMMLDWKPKRPDMLMDPFGIGKIVHDGLVFQESFPIRSYEIGADRTASIETLLNHLQETALNHVKKSRLLGDGFGSTPEMCKKNLIWVVARMQVVVDRYPTWGDVVQVHTWVSASGKNGMRRDWVVSDSETGEILTRASSVWVMMNKLTRRISKMPEEVRGEIEPYFLNLAPVVEEENGKLPKLDDDTADYKRTGLSPRWSDLDVNQHVNNVKYIGWILESAPQSILESHELCAMTLEYRRECKRDSVLQSLTAVSSADVGNLAQSGGVECKHLLRFEDGAEIVKGRTEWRPKHLHNLGANNHFPAEST 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00819 409 CDD 4HBT 130 246 - -
Accr12g00819 409 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 50 394 IPR045023 GO:0006633|GO:0016297
Accr12g00819 409 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 124 269 IPR029069 -
Accr12g00819 409 MobiDBLite consensus disorder prediction 1 29 - -
Accr12g00819 409 Pfam Acyl-ATP thioesterase 1 116 IPR021113 GO:0016790
Accr12g00819 409 MobiDBLite consensus disorder prediction 8 22 - -
Accr12g00819 409 Pfam Acyl-ACP thioesterase 127 391 IPR002864 GO:0006633|GO:0016790
Accr12g00819 409 Gene3D Hotdog Thioesterase 120 396 - -
Accr12g00819 409 FunFam Acyl-[acyl-carrier-protein] hydrolase 121 396 - -
Accr12g00819 409 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 282 391 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00819 Accr-Chr12 8228353 8230926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00819 1 393 Acyl Lipid Metabolism Gene Families AT1G08510 70.297 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00819 K10781 - gmx:100170693 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr12g00819 12 8228353 8230926 Accr12g00819 12 8228353 8230926 ECH