Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00815 ATGGTATTAGATTTTAGGTATCACTACCACCTAATAATAATGGTGTTCTTCTTCTTCTTCGTCTTTTGTGCTATGGCCTCGAGGGTTTCTGGCGTTGGAGTGAACTGGGGAACTATGGCCACTCATCAGCTTCCGCCCAAGAAGGTGGTTAAGATGCTGAAGCAAAATGGGTTTGGTAAATTGAAGCTGTTTGATGCAGACGAGTGGATCATGGCGGCGCTGATGGGGACTGATATCGAAGTTATGCTTGCAATCCCTAATAACATGTTGGAGGAAATGAGTAAAACTCCTAGAGCTGCAGATTCTTGGGTCGCTGAAAATGTGACTGGTTACTTGTATCCTGGTGGAGTCAATATCAAGTTTGTTGCCGTGGGTAACGAGCCTTTCCTTAAAGCATATAATGGCTCCTATCTCCATACTACTTTCCCAGCTCTGAAGAACATACAAACATCACTCTATAATGCTGGCTTGGGTTCAAAGGTTAAAGTCACAGTTCCCTTCAATGCAGACATTTACTTTTCCCCTGAATCAAATCCAGTGCCATCAGCTGGTGACTTCAGGCCTGAAATAAGAGACATCACCCTTGAAATCATCCAGTTCCTATATTCATGTGAGGCCCCTCTCACTGTAAATATATACCCCTTCCTTAGTCTTTATGACAACGACAACTTCCCCATTGAATTTGCATTTTTTGAGGGAAACAGCAGGCCTCTTAGAGATGGAAGTTTACTTTACAATAATGTATTCGATGCCAATCTGGACACTCTTTTATGGGCTCTAGAAAAGGCAGGGTACCCTGACATGCAAATCCTCGTAGGCGAAGTAGGTTGGCCAACTGATGGTGATAAGAATGCTAACATTCAAAAGGCAAAGAGATTCAACCAAGGTTTGCTTAAACATGTTATGAGTGGAAATGGTACACCTAAAAGGAGAGGGATCATCGACATGTATCTCTTCAGCCTCATCGATGAGAACGCAAAAAGCATTGCTCCCGGCATGTTTGAGAGGCACTGGGGGATTTTCGAGTTTGATGGGAAGCCAAAGTATGAACTAGACTTAGCAGGTCAAGAACTAAACAAGGGTCTGGCTCCTGTACATGGTATAAAATATATGGAAAGACAATGGTGTGTTTTGAACACTGATGCTGGTACTAATGAACGTTTTTTGGCTCGTAGTATTGACTATGCTTGTAGTCAATCTGATTGTACTGCTTTGGGTTATGGATCTTCTTGTAATAATCTGAGCCTACAAGGGAATGCTTCTTATGCCTTCAATATGTATTATCAAGTACACAACCAAAGGGACTGGGATTGTGATTTCTCTGGTTTGGCTATTGTAACAGATGAGGATCCATCAGAAAATGGATGCCACTTCCCAGTGATGATTTCTTATGGCTCTTCATTAATGGTGCATGGAGGGCTATCGGATATACTAAGGAATGTTTTGTGTGTGTGTACTTTGATTATGATTTTGCTATAG 1479 0.4199 MVLDFRYHYHLIIMVFFFFFVFCAMASRVSGVGVNWGTMATHQLPPKKVVKMLKQNGFGKLKLFDADEWIMAALMGTDIEVMLAIPNNMLEEMSKTPRAADSWVAENVTGYLYPGGVNIKFVAVGNEPFLKAYNGSYLHTTFPALKNIQTSLYNAGLGSKVKVTVPFNADIYFSPESNPVPSAGDFRPEIRDITLEIIQFLYSCEAPLTVNIYPFLSLYDNDNFPIEFAFFEGNSRPLRDGSLLYNNVFDANLDTLLWALEKAGYPDMQILVGEVGWPTDGDKNANIQKAKRFNQGLLKHVMSGNGTPKRRGIIDMYLFSLIDENAKSIAPGMFERHWGIFEFDGKPKYELDLAGQELNKGLAPVHGIKYMERQWCVLNTDAGTNERFLARSIDYACSQSDCTALGYGSSCNNLSLQGNASYAFNMYYQVHNQRDWDCDFSGLAIVTDEDPSENGCHFPVMISYGSSLMVHGGLSDILRNVLCVCTLIMILL 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00815 492 Gene3D Glycosidases 31 360 - -
Accr12g00815 492 FunFam Glucan endo-1,3-beta-glucosidase 5 31 359 - -
Accr12g00815 492 SMART X8_cls 374 458 IPR012946 -
Accr12g00815 492 FunFam Glucan endo-1,3-beta-glucosidase 8 370 467 - -
Accr12g00815 492 Pfam X8 domain 374 444 IPR012946 -
Accr12g00815 492 SUPERFAMILY (Trans)glycosidases 32 352 IPR017853 -
Accr12g00815 492 ProSitePatterns Glycosyl hydrolases family 17 signature. 268 281 IPR000490 GO:0004553|GO:0005975
Accr12g00815 492 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 20 447 IPR044965 GO:0004553|GO:0005975
Accr12g00815 492 Gene3D - 369 461 - -
Accr12g00815 492 Pfam Glycosyl hydrolases family 17 32 352 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00815 Accr-Chr12 8167860 8169695 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00815 29 462 Miscellaneous Gene Families AT2G19440 59.908 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00815 - - gmx:100802345 758.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr12g00815 12 8167860 8169695 Accr12g00815 12 8167860 8169695 ECH