Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00764 ATGTCGAAGCTGCTTCTCCACAGCTCTCATCTCAGCTCATTTCACCCTTTTCCTACCACTCGCTTCTCGGCCTCTGTTGCCCCCGTTTCTCTCCTCCATTTTCGAAGCCGCTTCTCCGTCTCGGTTTCTTCTCAATCGCACCTTCGAAGCATCTGTCACTTTCAGTCCCGTAGAGACCTATCAGTTTGTGCCTTCGATTCTTCATCTTCAGAGACTAAGGACGAGGAAGAAGCTGCGAGGAAGGATGGAATCAATGATCAGTCTGTTAAAACTGCAGAGGAGGATTATCCGACCGGGGAATTTGAATTTGAACCCATTACGGGGTGGAGAGGATTTCTAGTACAGCTTAAGATGCTGGTTGCTTTCCCTTGGGAGCGTGTTCGCAAGGGCAGTGTTCTCACAATGAAGTTGCGCGGCCAGATATCCGATCAAATAAAGAGTAGATTCTCTCGAGGATTGTCTCTACCTCAGATTTGTGAGAACTTACTGAAAGCTGCATATGATCCCCGTATTTCTGGTGTCTACCTCCATATTGATATTTTGAATTGTGGGTGGGGTAAAGTAGAAGAAATTCGAAGGCACATACTGAACTTCAAACAGTCAGGAAAATTTGTTGTGGCTTATGTCCCTTCATGTCAGGAAAAAGAATACTACCTTGCTTGTGCTTGTGATGAGATATACGCCCCTCCAAGTGCCTATTTTTCGCTGTTTGGCTTGACTGTTCAAGCTTCATTCCTCAGGGGTGTTTTAGATAACATAGGAATTGAACCACAAGTAGAAAGGATTGGCAAATACAAAAGTGCTGGGGATCAACTGGCCCGCAGAACCATATCTGACGCAAACAGTGAGATGCTGACTGTATTGCTTGATAATATCTACACAAATTGGCTGGATAAAGTTTCATCTGCAAAAGGAAAAAAACTAGAAGATATTGAGAACTTTATAAATGAAGGAGTCTATCAAGTAGACAAGCTGAAAGAAGAGGGCTTCATAACTAACATAATCTATGATGACGAGGTTATTTCCATGTTGAAAGAGAGACTTGGAGTGAAAACAGATAAAAATCTTCCTATGGTGGATTACAGAAAGTATTCCCGAGTTAGGAAATGGACTGTTGGAATATCAGGTGGTAAGGACTTGATAGCTCTCATCCGAGCCTCAGGGAGTATTAGCCGTATTGAAGGTCCATTAGGTATGTCAGGCTCAGCAATTATTGGGGAGAAGTTTATTGAGAAGATTCGCAGTGTCAGAGAGTCCAAAAGATATAAGGCTGCTATTATCCGAATTGACAGTCCTGGAGGTGATGCTCTTGCGTCTGATCTGATGTGGAGAGAAATCAGACTTTTGGCTGCTTCAAAACCAGTCATTGCTTCAATGTCTGATGTGGCAGCAAGTGGAGGATATTATATGGCAATGGCAACAGGAACTATTGTTGCAGAAAGCCTTACTTTAACTGGTTCAATTGGAGTGGTTACAGGAAAATTTAACCTGGGTAAACTGTACGAGAAGATTGGATTTAATAAAGAGATCATATCAAGGGGAAGATATGCTGAGCTACTTGCGGCAGAACAACGCCCTTTTAGTCCGGATGAAGCCGAGCTATTTGCCAAGTCTGCACAGCATGCTTACAAGCAATTTCGAGATAAGGCAGCATTATCCAGATCCATGACTGTAGATAAGATGGAGGAGGTTGCGCAGGGAAGAGTTTGGACCGGTAAAGATGCGGCTGATCGTGGTTTGGTTGATGCTATCGGTGGGCTTTCTCGTGCAATTGCCATAGCAAAATCGAAGGCCAACATACCTCAAGACAAACAGGTAACAATTGTGGAGCTCTCAAGAACCGGGCCTTCCCTGCCAGAGGTTTTAAGTGGCATTGGGAGCACCCTAGCTGGAGTAGACAGAACATTGAAGGAGCTGTTACAAAGCTTGACACTTTCTGATGGGGTTCAAGCCAGGATGGATGGAATCATGTTTGAGAGATTGGAAGGATATGCTTACGCCAATCCCATATTGACATTGATTAAAGATTACCTTAGTTCCCTGTAG 2046 0.4384 MSKLLLHSSHLSSFHPFPTTRFSASVAPVSLLHFRSRFSVSVSSQSHLRSICHFQSRRDLSVCAFDSSSSETKDEEEAARKDGINDQSVKTAEEDYPTGEFEFEPITGWRGFLVQLKMLVAFPWERVRKGSVLTMKLRGQISDQIKSRFSRGLSLPQICENLLKAAYDPRISGVYLHIDILNCGWGKVEEIRRHILNFKQSGKFVVAYVPSCQEKEYYLACACDEIYAPPSAYFSLFGLTVQASFLRGVLDNIGIEPQVERIGKYKSAGDQLARRTISDANSEMLTVLLDNIYTNWLDKVSSAKGKKLEDIENFINEGVYQVDKLKEEGFITNIIYDDEVISMLKERLGVKTDKNLPMVDYRKYSRVRKWTVGISGGKDLIALIRASGSISRIEGPLGMSGSAIIGEKFIEKIRSVRESKRYKAAIIRIDSPGGDALASDLMWREIRLLAASKPVIASMSDVAASGGYYMAMATGTIVAESLTLTGSIGVVTGKFNLGKLYEKIGFNKEIISRGRYAELLAAEQRPFSPDEAELFAKSAQHAYKQFRDKAALSRSMTVDKMEEVAQGRVWTGKDAADRGLVDAIGGLSRAIAIAKSKANIPQDKQVTIVELSRTGPSLPEVLSGIGSTLAGVDRTLKELLQSLTLSDGVQARMDGIMFERLEGYAYANPILTLIKDYLSSL 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00764 681 Gene3D - 376 525 - -
Accr12g00764 681 Pfam Peptidase family S49 449 600 IPR002142 GO:0006508|GO:0008233
Accr12g00764 681 Pfam Peptidase family S49 198 350 IPR002142 GO:0006508|GO:0008233
Accr12g00764 681 SUPERFAMILY ClpP/crotonase 405 586 IPR029045 -
Accr12g00764 681 SUPERFAMILY ClpP/crotonase 117 336 IPR029045 -
Accr12g00764 681 CDD S49_Sppa_N_C 381 595 IPR047272 -
Accr12g00764 681 Gene3D - 130 366 - -
Accr12g00764 681 Gene3D - 526 652 - -
Accr12g00764 681 CDD S49_SppA_67K_type 133 346 IPR047217 -
Accr12g00764 681 NCBIfam signal peptide peptidase SppA 392 595 IPR004635 GO:0006508|GO:0008233
Accr12g00764 681 PIRSF Protease_4_SppA 63 681 IPR004634 GO:0006465|GO:0008233|GO:0016020
Accr12g00764 681 PANTHER PROTEASE 4 85 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00764 Accr-Chr12 7441720 7448690 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00764 K04773 - qsa:O6P43_022959 1044.26