Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00710 ATGGGATTCCACATTGCCTTATTTCTCTTCTTGGCTTTTCTTCCACCATCTTTAAGTCAAGAAGTTATTCATGCTTCAATTCTAGTTCATGGAAATCAAGCAAAAGCTGAAACTGATGATAACTTCATTTGTGCTACGATTGATTGGTGGCCTCATGACAAATGTGACTATGACCACTGCCCATGGGGATATTCATCAGTCACTAATTTGGACTTGTCTCACCCTTTCCTTGCCAAGGCAGTACAAGCTCTGAAGCCTTTGAGGATAAGATTGGGAGGTTCTTTGCAAGACCAAGTGCTGTATGATGTAGAAACTTTGAAGGTGCCTTGCCATCCCTTTCAAAAGATGAAAGGTGGATTATTTGGATTTTCAAAGGGATGTTTACACATGAAAAGGTGGGATGAGCTGAATCATTTTTTCAAAGAAACAGGAGCTATGGTGACATTTGGCTTGAATGCACTTAATGGGAGGCACCAAATTAGTCAGAGTGTTTGGGGAGGAGACTGGGACTCTAGCAATGCTTATGCTTTCATTAGTTACACTGTCTCAAAGGGATATAAAATTGATTCATGGGAATTTGGTAACGAGCTAAGTGGTAAGGGCATTGGTGCAAGTGTTGGTCCTGCACAGTATGGAAAAGACTTAATACACCTTAAGAAAATTTTAGATATCTTATATGAGCGATCTCGGTTCAAACCTGCGCTTGTAGCACCTGGAGGTTTCTATCAAAAGGATTGGTATAACAAACTACTACAGGTTTCAGGTTCTGGAATAATCAATGTTCTGACTCATCACATATACAATTTGGGCCCAGGCAGTGACCCCAATCTAGAAAAGAAGATTCTAGATCCTGCGCTTTTGAGCAACATAGCATCAACATTTGGCAATCTTTCAGAAAGCATTGAAAAAGTGGGCCCTTGGTCTTCTGCATGGGTTGGAGAAGCTGGTGGGGCGTACAATAGTGGCAGTCGTTATGTTTCTAGCACATTTTTAAACAGCTTTTGGTACTTGGATCAACTTGGAATGGCATCCACCTACAACACCAAAGTCTATTGTAGGCAAACTTTGATTGGAGGCTACTATGGCCTTCTCAATATAACCACTTTTTCTCCCAATCCAGACTATTATAGTGCCCTTTTGTGGCAAAGGCTTATGGGAAAGAAGGTTCTTCAGGCTTCTAGTGATTCTTCTTCGCCTCATTTGCGCACTTATGCCCATTGTTCAAAAGGAAGAGAAGGGGTAACAGTACTGTTGATCAATTTGAGCAATCAGACTAATTTCATTCTCAATATTAAAAACCCTGTGGCTGCAAACAATGAAGGAACCGAAGAGGTGAAAATCATACGCAGAGACAACTCTTTCACTTATCATCTCAAGAAGACATTTTCATGGGTTGGAACGAAAGGATCTTATGTCTCTTTCAGAGAAGAGTACCATTTAACCCCAAAAGATCGCGACCCTCGAAGCCGTACCGTGTTGCTAAACGGTATTCCAATACAGTTAACAAGCAAAGGAGACATTCCAAATTTGGATCCAGTGCACAAGAATGTGCAATCTCCCATTTATGTAGCTCCTCTGTCCATTGTATTTGTTGTGTACCCAAACTTTGATGCTCCAGCTTGTGTTAGACCCCAAAAGCATTAG 1644 0.4112 MGFHIALFLFLAFLPPSLSQEVIHASILVHGNQAKAETDDNFICATIDWWPHDKCDYDHCPWGYSSVTNLDLSHPFLAKAVQALKPLRIRLGGSLQDQVLYDVETLKVPCHPFQKMKGGLFGFSKGCLHMKRWDELNHFFKETGAMVTFGLNALNGRHQISQSVWGGDWDSSNAYAFISYTVSKGYKIDSWEFGNELSGKGIGASVGPAQYGKDLIHLKKILDILYERSRFKPALVAPGGFYQKDWYNKLLQVSGSGIINVLTHHIYNLGPGSDPNLEKKILDPALLSNIASTFGNLSESIEKVGPWSSAWVGEAGGAYNSGSRYVSSTFLNSFWYLDQLGMASTYNTKVYCRQTLIGGYYGLLNITTFSPNPDYYSALLWQRLMGKKVLQASSDSSSPHLRTYAHCSKGREGVTVLLINLSNQTNFILNIKNPVAANNEGTEEVKIIRRDNSFTYHLKKTFSWVGTKGSYVSFREEYHLTPKDRDPRSRTVLLNGIPIQLTSKGDIPNLDPVHKNVQSPIYVAPLSIVFVVYPNFDAPACVRPQKH 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00710 547 SUPERFAMILY (Trans)glycosidases 38 385 IPR017853 -
Accr12g00710 547 FunFam heparanase-like protein 3 62 383 - -
Accr12g00710 547 Gene3D Glycosidases 62 383 - -
Accr12g00710 547 PANTHER HEPARANASE-RELATED 19 541 - -
Accr12g00710 547 Pfam Glycosyl hydrolase family 79, N-terminal domain 25 341 IPR005199 GO:0016020|GO:0016798
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00710 Accr-Chr12 6759843 6763747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00710 1 541 Glycoside Hydrolase AT5G07830 60.254 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00710 K07964 - gmx:100807012 856.67