Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00659 ATGTTGGAGGGTCCATCCTTTCTTGTTGTAAGGGAGTTACCAAGCTCATGTGAGGAAGAGAGCAGGTGGATTTATAATACCATTCATGTAATGGAGCTCTCGAACAACAAGCGCAGACTCGAACATGAAGGACAAATGGTGTTAGGAAAGTCCTGCAAACGTTCAGATGCTCCTGACGAAGCAGGAGAAACATGGTTGAGGGTGCGTGACCTTTCCCTTTCCCATAACCAAATAAATGACCAAAATCATGCTGGTGATCAGTCAGATTCAAGCTCACTCATCCACCAACTTGGGCGGGACATGTCAATTAACTGTCTCCTTCGATGCTCAAGGGCTGATTATGGTTCAATTGCCTCAGTGAATCAGAATTTTCGATCTCTCATTCGAACTGGAGAACTATATAAACTCAGGCGGCAGTTGGGTATTATAGAACATTGGGTTTACTTCTCTTGCAATCTCCTTGAATGGGAGGCATTTGATCCAAACAATGGTCGATGGATGCGTTTGCCTGGAATGACTTGTAATGAATGCTTTATGTGTTCGGACAAGGAGTCACTTGCTGTTGGTACCGAACTTTTGGTTTTTGGAAAGGAGATCATGTCTCCTGTTATTTACAAATACAGCATATTGACAAACTCATGGTCATCTGCTAAAGAAATGAATACTCCTAGATGCTTGTTTGGTTCTGCAAGCCTTGGTGAAATAGCCATACTGGCTGGTGGCTGTGACCCGCGCGGCAACATCTTAAGTTCAGCTGAGCTTTACAACTCAGAAACTGGAGATTGGGAGACTCTTCCAAACATGAACAGAGCAAGGAAAATGTGCTCTGGTGTATTTATGGATGGAAAATTTTATGTCATTGGGGGCATTGGAGTAGGCAACTCAAGACAGTTGACATCTGGTGAGGAGTTTGATTTACAGACAAGGAAATGGCGTGAAATACCCAATATGTTCCCTGGTCGATATGGAGGGGGAGGGGCTGGGAATGCTGAGGCGCCAGCTGCTGCTGAGGCACCTCCTTTAATTGCAGTTGTAAATAATGTATTGTATGCAGCAGATTATGCTCTGCAGGAGGTAAGGAAGTATGATAAAGTCAGGAATTTATGGGTACCCATTGGAAGGCTGCCTGAGCGGGCAGCTTCAATGAATGGTTGGGGATTAGCTTTTCGGGCATGTGGAGATAGGCTAATTGTTATTGGTGGGCCGCGGGATTTAAATGTGAGGGCAATTGAAGTTAATGCTTGGACCCCTGGGGAAGGCGAACCACAGTGGAACCTGTTGGCCAGCAGGCAATCAGGGAGCTTTGTGTATAATTGTGCTGTGATGGGATGCTGA 1335 0.4532 MLEGPSFLVVRELPSSCEEESRWIYNTIHVMELSNNKRRLEHEGQMVLGKSCKRSDAPDEAGETWLRVRDLSLSHNQINDQNHAGDQSDSSSLIHQLGRDMSINCLLRCSRADYGSIASVNQNFRSLIRTGELYKLRRQLGIIEHWVYFSCNLLEWEAFDPNNGRWMRLPGMTCNECFMCSDKESLAVGTELLVFGKEIMSPVIYKYSILTNSWSSAKEMNTPRCLFGSASLGEIAILAGGCDPRGNILSSAELYNSETGDWETLPNMNRARKMCSGVFMDGKFYVIGGIGVGNSRQLTSGEEFDLQTRKWREIPNMFPGRYGGGGAGNAEAPAAAEAPPLIAVVNNVLYAADYALQEVRKYDKVRNLWVPIGRLPERAASMNGWGLAFRACGDRLIVIGGPRDLNVRAIEVNAWTPGEGEPQWNLLASRQSGSFVYNCAVMGC 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00659 444 SUPERFAMILY Kelch motif 152 439 IPR015915 GO:0005515
Accr12g00659 444 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 84 444 - -
Accr12g00659 444 FunFam F-box/kelch-repeat protein SKIP11 139 429 - -
Accr12g00659 444 Pfam Kelch motif 223 269 IPR006652 GO:0005515
Accr12g00659 444 Pfam Kelch motif 271 317 IPR006652 GO:0005515
Accr12g00659 444 SMART kelc_smart 235 282 IPR006652 GO:0005515
Accr12g00659 444 SMART kelc_smart 191 234 IPR006652 GO:0005515
Accr12g00659 444 SMART kelc_smart 283 331 IPR006652 GO:0005515
Accr12g00659 444 Gene3D - 136 433 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00659 Accr-Chr12 6191064 6192398 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00659 97 316 Miscellaneous Gene Families AT4G33900 27.826 5.77e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00659 - - gmx:100788507 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr12g00659 12 6191064 6192398 Accr12g00659 12 6191064 6192398 ECH