Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00620 ATGTCTAGCAGTCTTCACACTCTCTTTCTGTCTTTCTTCATTTCACATATTCTCAAGTCCTCTTCATCTTACCCCTTTGCCGCTAGATCTCGAATGCCTTCTGAATTCGAACCTCTCTCGCGGGATAGAGTTGGAAAAGGACTTGGCTTCTCTATCTCCAAACCTCCCAAGGGTCTATGCTTAGAGAAAATTGGGGATGGAGCTTACCTTGATATGGTTCCGCATCCTGATGGTTCCAACCGTGCTTTCTTGGCAAATTTGCAAGGCAAGGTATGGCTAGTTTCAATTCCTGATGAAGGGTCTAATGGGATTTTGGAATTCGACGAATCCAAACCCTTCCTAGATATTAGTGACTGTGTCCTATTCGATTCTGGGCACGGTTTGATGGGAATTGCATTTCATCCAAACTTCACACAAAATGGCCGCTTCTTTCTCTCATATTGTTGTGATCAGACGAAAAATCCTAACTGTTCAGGGAGATGTTCTTGTGACTCAGATGTGAACTGTGACCCTTCGAAACTTGGTTTTGATGATGGTGTCCTGCCATGTCAGTATCATGTTGTAGTTGCAGAGTTTACAGTCAATGGCACGGCATCAGAGCCTACTCTGGCTGAAAGTGCCAATCCATTGGAAGTGAGAAGGATATTCACAATGGGTGTTCCGTACAGAGGAGGTCATGCTGGTCAGATTCTCTTTGGACCTGCAGATGGATACTTGTACCTCATGCTGGCAGATGGTTCTGATGGTGATGATCCTTACAACTTTGCTCAGAACAAGAGGTCGTTGCTGGGAAAGATTTTGAGGATTGATGTAGACAATTTACCCAGTACTAGAAAGATAAAGGATCAAGGTTTATGGGGAAACTACTGTATTCCTAGAGATAATCCATATCTGGATGACAAGGAGCTTGAACCAGAGATATTTGCTTTGGGTTTTAGGGACCCTTGGCGTTGTAGTTTTGACTCCAAGAGGCCCTCCTACTTTCTTTGTGGAGACTCAGGACAAGATCAATATGAAGAGATCGATATGGTCAAAAAGGGCGGGAACTATGGGTGGCGAGTCTACGAGGGACCTTTACTTTTCCAGCCATCAGAGTCTCCTGGAGGAAACACTTCTGCCAGTTCCATACACCCCATCTTTCCTGTCTTGGGTTATACTCATTCAGAGATTGATAACATAGGTGGTTCTGCATCCGTAGTAGGTGGCTATTTTTATCGCTCCATGACTGATCCCTGCATGTACGGAAGGTACTTGTACACAGATCTGTATGCAGGATCTGTATTGATAGGTGCAGAGAGTCCTGAAGGAAGTGGAAACTTCACAAGGGCCAAAATTCCTTTTACATGTGCTCCTGACTCTTCACAGCAATGCTCTTTTGTGAAGGGAAGTTCAATTCCTGTATTGGGGTATGTCTTCTCATTTGCAGAAGACAACAGGAAGGACATTTATTATCTCACAAGCACTGGCGTTTATAGAGTAACACGGCCAAGACGTTGTGGATATTTGTGCCCCAAGGAAAAGGCTGTTGTTTCAGAATATGATAAACCTCACTCTTCTTCCTCATTTCCTGAAGATTTTGATTTCCTTCTGTTGTTAGTCTTTCTCATACTGCATTCTGTATTTTGA 1626 0.4367 MSSSLHTLFLSFFISHILKSSSSYPFAARSRMPSEFEPLSRDRVGKGLGFSISKPPKGLCLEKIGDGAYLDMVPHPDGSNRAFLANLQGKVWLVSIPDEGSNGILEFDESKPFLDISDCVLFDSGHGLMGIAFHPNFTQNGRFFLSYCCDQTKNPNCSGRCSCDSDVNCDPSKLGFDDGVLPCQYHVVVAEFTVNGTASEPTLAESANPLEVRRIFTMGVPYRGGHAGQILFGPADGYLYLMLADGSDGDDPYNFAQNKRSLLGKILRIDVDNLPSTRKIKDQGLWGNYCIPRDNPYLDDKELEPEIFALGFRDPWRCSFDSKRPSYFLCGDSGQDQYEEIDMVKKGGNYGWRVYEGPLLFQPSESPGGNTSASSIHPIFPVLGYTHSEIDNIGGSASVVGGYFYRSMTDPCMYGRYLYTDLYAGSVLIGAESPEGSGNFTRAKIPFTCAPDSSQQCSFVKGSSIPVLGYVFSFAEDNRKDIYYLTSTGVYRVTRPRRCGYLCPKEKAVVSEYDKPHSSSSFPEDFDFLLLLVFLILHSVF 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00620 541 Gene3D - 65 466 IPR011042 -
Accr12g00620 541 PANTHER HEDGEHOG-INTERACTING PROTEIN 53 510 - -
Accr12g00620 541 Pfam Glucose / Sorbosone dehydrogenase 72 361 IPR012938 -
Accr12g00620 541 FunFam HHIP-like 1 63 488 - -
Accr12g00620 541 SUPERFAMILY Soluble quinoprotein glucose dehydrogenase 67 428 IPR011041 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00620 Accr-Chr12 5793487 5795985 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00620 - - fve:101310424 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00089 8 1351361 1355119 Accr12g00620 12 5793487 5795985 CCT
Accr12g00620 12 5793487 5795985 Accr12g00620 12 5793487 5795985 ECH