Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00603 ATGGCTCCGTCTTCAGCTCCGGGTCATAGCCTCAAACAGAAGGTGTTCACTTGCCTCTCCAAGCTCTCCGACCGCGATACTCAGTCCATCGCCGCCAATGAGCTCGAGTCCATTGCTCGGAACCTTGATTCAAACTCCGTACCGGTGTTCCTCTCATGCATTCACTCCACCAATTCATCAGACAAATCGCCGGTTCGTAAACAATGCGTACACCTCATGCAGGTTCTTTCGGAAACGCACGGAAACACGCTTTCTCCTTATCTTTCAAAAATTCTTGCACATATAGTTCGTCGGCTCCGTGACCCGGACTCGGCGGTTCGATCTGCTTGCGTGAATTCCGTGTCGGCATTGTCCGCGCACATCACCAAGCAACCGTTTGCTTCTTTCCTGAAGCCGTTAACTGAGGCGCTGTTCACTGAGCAGGACCAAAATTCACAGTTAGGCGCGGTGCTTTGTCTGGCTTCTGCCATTGATGCAGCTCCTGACCCGGACCCTGCGAGATTGGCGAAGCTCTTGCCAAGGTTCGAGAAGTTGTTGAGAAACGGGAGCTTTAAGGCGAAGCCGGCGCTGTTGACGCTCATTGGAAGTGTTATTGAAGCCGGTGGACTGTCCAGTTATGCGGCTTTGACCAATTTGGTTCCATGCATGGTGGAATTCTTGAGCAGCAACGACTGGTCGGCCAGGAAGGCTTCGGCCGAGACGTTGACCAAGTTGGCGATAGTGGAGAGGGACGTGTTATCAGAATTCAAGGCCGGCTGTTTGAATGTCTTTGAGAATCGACGATTCGACAAGGTTAAGGTAGTTCGGGAGGTTATGAATCAGATGTGTGAGGTGTGGAAGCAGATTCCTGATATATCGGATGGATTCTCTCCACCACCTAAATCTCAATCTTCTTCCTCAGAAAATGTAAGTGATGGGCGTTATCCGGCATTCTCGCAGAATTCATGTAGTCCTGGTTCTGTAATGCCCCGATTATGGAAGAAATCCAATCCAGTTAGCAAATCAAGCCCTGATAGTTCTTCTGTGAGCAATGCTAAGAAATTAAGCTTTAGTAATAAGAGAACAAGCACAGGTGCTTATCAGGGTTATGTTGAAGAAAGAGATGAAATGATACTGGAAAAAAACAAAAAGGAGAAAAGTAACTTTTCCAGGCCAGAACTGAAACGGCCCATTCTCAAAAGAAATCTGGATGAAAGAAAGCGCACGTTTGGTGGCTTCAAAACAGGATCTCGTGTAGTTTCATGCCATGAAGAGAGCCGAGATTCAGTTGCTATCAGTGACGTTGCTAAAGATTTCCATGGGAATGACAAATACTATGAAGAGTTGGCTTTAATCCGCAGCCAGTTATTTCAAATTGAAAAGCAGCAGTCAAATATACTTGATCTCTTAGAGAGACTCATGAATAGCTCACAGAATGGAATGCAATCATTAGAGTCTCGTGTACATGGTCTTGAGTTAGCATTGGAAGGGCTCTCTCATGATTTGGCTGTATCATATAGAAGGGTGACTAATTCTGTTGCTCCCGGTGATTCTTGCGGCTTGCCGCCTGGTGCAGAAATTCTGAGCCCCAAATTCTGGAGGAAAACTCAGGTCCTGTATCCATACTCCCAGTTCTCTAGATTTGGTGGCACCCCATCACAAGCTGCCATGTGGTACAGAGCTCACATGAAGGGTGATTCTGAAACTGAGTTGACAAATCAAAAGCGCAGACTCCATGGTGATGGTGGATTCATCACAACTCCGCTGGCAGAAGTCCATACTAACTTGGCAGATACAAGACATTGTGCCTGA 1791 0.4718 MAPSSAPGHSLKQKVFTCLSKLSDRDTQSIAANELESIARNLDSNSVPVFLSCIHSTNSSDKSPVRKQCVHLMQVLSETHGNTLSPYLSKILAHIVRRLRDPDSAVRSACVNSVSALSAHITKQPFASFLKPLTEALFTEQDQNSQLGAVLCLASAIDAAPDPDPARLAKLLPRFEKLLRNGSFKAKPALLTLIGSVIEAGGLSSYAALTNLVPCMVEFLSSNDWSARKASAETLTKLAIVERDVLSEFKAGCLNVFENRRFDKVKVVREVMNQMCEVWKQIPDISDGFSPPPKSQSSSSENVSDGRYPAFSQNSCSPGSVMPRLWKKSNPVSKSSPDSSSVSNAKKLSFSNKRTSTGAYQGYVEERDEMILEKNKKEKSNFSRPELKRPILKRNLDERKRTFGGFKTGSRVVSCHEESRDSVAISDVAKDFHGNDKYYEELALIRSQLFQIEKQQSNILDLLERLMNSSQNGMQSLESRVHGLELALEGLSHDLAVSYRRVTNSVAPGDSCGLPPGAEILSPKFWRKTQVLYPYSQFSRFGGTPSQAAMWYRAHMKGDSETELTNQKRRLHGDGGFITTPLAEVHTNLADTRHCA 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00603 596 SUPERFAMILY ARM repeat 13 279 IPR016024 -
Accr12g00603 596 MobiDBLite consensus disorder prediction 287 347 - -
Accr12g00603 596 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 4 556 IPR033337 GO:0005874|GO:0008017
Accr12g00603 596 MobiDBLite consensus disorder prediction 290 320 - -
Accr12g00603 596 Gene3D - 9 369 IPR011989 -
Accr12g00603 596 Coils Coil 452 494 - -
Accr12g00603 596 MobiDBLite consensus disorder prediction 329 347 - -
Accr12g00603 596 FunFam TORTIFOLIA1-like protein 3 isoform A 2 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00603 Accr-Chr12 5661858 5664418 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00603 - - qsa:O6P43_022767 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00106 8 1487516 1489941 Accr12g00603 12 5661858 5664418 CCT
Accr12g00603 12 5661858 5664418 Accr12g00603 12 5661858 5664418 ECH