Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00565 ATGATGAAAAAACAATCTTTGAGAAACTTTGAGGCGTCCACTCAGGTGGACTCGCCTCACTCCCCGCTTCGGTTTCAATCGCCTTTGAGATCCGAACAGGGCGAGCCGACTGAATCACCTGAGTTCCGATCGCCGGAGAACTCCCCGGACAACTCTAAAGCCATTGTACCTGTCAACAAAGTCACTCAATGCTCTCCCCCGAGATCCCCCTTGCCTCCTTCGAACCGCCAAAAGGCGCCAGAGAACGCGCCTCCGGCGATGCCCCCTGCATCGGTGGTGATGGTTAATCGGGCCATGAGGGAGGAGCCTCCGCCATCCGTGACGAAGGTGGGCCCTACAAGCGGCGTAGGGCGTGCTGGAGATGGTGTTCATGGTAGATCCAGGCCGGCGGCGGCGTCGACTCCGGCATGGTCAAAGAGGGAGGAGATGTTGAGAAAGGCGGCGTTAGGGTTTAGGTTGAGTGAGGTGTTGCTTTGCTTGATTTCGTTTTCGGTTATGGCTGCTGATAAAACCCAAGGTTGGAGTGGCGACTCCTTTGATCGCTACAAGGAATACAGGTATTGTTTATCAGTGAATGTTATTGCGTTTGTATACTCAGGATTTCAAGCATGTGATCTGGCCTATCAACTAGTCACCGGAAAAAACATGATCAATCACCATCTCCGCTGTCACTTTGATTTCTTCATGGACCAGATTCTGGCATATCTTCTAATATCAGCATCATCATCTGCAGCCACCCGTGTTGATGATTGGCAATCAAATTGGGGGAAAGACAAGTTCACAGAGATGGCCAGTGCTTCTGTGGGAATGTCGTTTCTGGCTTTCATTGCCTTTGCCTTTAGCTCACTCATCTCCGGCTACAACCTTTGTGCCCGTAGCTCCATTTGA 888 0.5146 MMKKQSLRNFEASTQVDSPHSPLRFQSPLRSEQGEPTESPEFRSPENSPDNSKAIVPVNKVTQCSPPRSPLPPSNRQKAPENAPPAMPPASVVMVNRAMREEPPPSVTKVGPTSGVGRAGDGVHGRSRPAAASTPAWSKREEMLRKAALGFRLSEVLLCLISFSVMAADKTQGWSGDSFDRYKEYRYCLSVNVIAFVYSGFQACDLAYQLVTGKNMINHHLRCHFDFFMDQILAYLLISASSSAATRVDDWQSNWGKDKFTEMASASVGMSFLAFIAFAFSSLISGYNLCARSSI 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00565 295 MobiDBLite consensus disorder prediction 102 134 - -
Accr12g00565 295 MobiDBLite consensus disorder prediction 66 87 - -
Accr12g00565 295 MobiDBLite consensus disorder prediction 1 65 - -
Accr12g00565 295 MobiDBLite consensus disorder prediction 1 89 - -
Accr12g00565 295 Pfam Casparian strip membrane protein domain 143 277 IPR006702 -
Accr12g00565 295 PANTHER CASP-LIKE PROTEIN 4A4 109 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00565 Accr-Chr12 5334330 5336720 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00565 - - qsa:O6P43_030878 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00164 8 2312532 2313661 Accr12g00565 12 5334330 5336720 CCT
Accr8g00164 8 2312532 2313661 Accr12g00565 12 5334330 5336720 ECH
Accr12g00565 12 5334330 5336720 Accr12g00565 12 5334330 5336720 ECH