Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00553 ATGTGTTTCGACAATATGTTGCTAGGAATCCATCACAATGGATCTAGTCCACGTTTGGAAGTTGATGAGATTGGAACTTCAGCTTCGAACAAATCCATTAAGCAAGAGGCAAGCGATGAATCAGATTATATGAAGATCCAGAATTCGATCTGGGAGACCGCGAGCAATGAAGGATCAACGGTTTCAGATTGCGGAAGTGCTGTTTCTGGAAGTGATCATGTGCAGCACCAGATGTTCGGTGAAGGGTTTTTTAGACTCGCTGAAGGAGACAAGGTTCATGACCTCATTCAGAGAAGATTCATTCTGGGTTTGGGGACGCTTGGGGCAAACACGAAGATCGTTGCAATTCATAGGAATGCTGGTTCTGGGGTTATGGCACAAGCTCGAATTCAATCATTCCAGGTTTATATGCGAGCTGAGGAGGAGCGTCGTGGTAATGCCAATGTGAAGTATGCGTGGTATGGGACTTCTGGCAAGGAAGAGGTACGACAGATTATTTCACACGGTTTTTGTAATGGCAGTGGTGAAACTCAGAATAAAGGACATTTTGGATGCGGATTATCTCTCTCTTCAGATGATTCTCCTATGGAAAGTTTGAAAAGCTCCGTTGTTGACAAAGATGGTCTAAGGCACTTATTACTATGTCGCGTTATTTTGGGGAGGCAGGAGCTTGTGCATCCTGGTTCTGATCAATGCCATCCTAGTTCTGATGAATATGACTCAGGGGTGGACAGCCTTTCAGCTCCCAAGAAGTATATCATTTGGTGTACCCGGATGAACACTCATATTTTTCCGGAATATGTTATAAGTTTCAAAGTTCCTAGCATGGAAGATCTGCTGAAGTTTGAAGGATCTGTAAGAAAACCATCTTCCCCTTGGATACCATTTCCAAGTCTAATTTCTTCGCTCGCCAAGTTTTTGCCTCCATCTAGTATTGCCTTGATCTCCAAGTTCCAAAAGGATCACAACGAAAAGAAGATTTCACGGAAAGAACTCATACAAAAATTAAGACGAATAACAGGAGACGAGTTGTTGATTACAGTCATCAAATCTTTCGTAGCAAGGAAACGTACAAGCGTTCAACTAAGGTGA 1092 0.4286 MCFDNMLLGIHHNGSSPRLEVDEIGTSASNKSIKQEASDESDYMKIQNSIWETASNEGSTVSDCGSAVSGSDHVQHQMFGEGFFRLAEGDKVHDLIQRRFILGLGTLGANTKIVAIHRNAGSGVMAQARIQSFQVYMRAEEERRGNANVKYAWYGTSGKEEVRQIISHGFCNGSGETQNKGHFGCGLSLSSDDSPMESLKSSVVDKDGLRHLLLCRVILGRQELVHPGSDQCHPSSDEYDSGVDSLSAPKKYIIWCTRMNTHIFPEYVISFKVPSMEDLLKFEGSVRKPSSPWIPFPSLISSLAKFLPPSSIALISKFQKDHNEKKISRKELIQKLRRITGDELLITVIKSFVARKRTSVQLR 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00553 363 ProSiteProfiles RST domain profile. 287 358 IPR022003 -
Accr12g00553 363 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 63 352 IPR044964 -
Accr12g00553 363 SUPERFAMILY ADP-ribosylation 84 274 - -
Accr12g00553 363 ProSiteProfiles PARP catalytic domain profile. 70 291 IPR012317 GO:0003950
Accr12g00553 363 Gene3D - 65 273 - -
Accr12g00553 363 Pfam RCD1-SRO-TAF4 (RST) plant domain 288 352 IPR022003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00553 Accr-Chr12 5225661 5227778 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00553 - - pcin:129319735 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00171 8 2427427 2429186 Accr12g00553 12 5225661 5227778 CCT
Accr12g00553 12 5225661 5227778 Accr12g00553 12 5225661 5227778 ECH