Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00532 ATGGCCGAGTCCTCTTCTTCTACACAGTGGAACTTCTATCAGACATTACGCCGACAAAGTACCCGTAACAGAGCCGGTGAACGTGAAGAAGATGATTACATAACAGCGATTCAATTCGAGAAACGTGGTCATCATCTAGCCACAGGAGATGAAGGAGGACGTGTTGTGATTTTTGAAAGAGATGATAGAAAGAATGTAACGTCATATCATCATAAATTTTTGGAGGAATTGGATTCCACTCCTGACCAACGACCTAAATTTCGGTTTAAGACAGAATTCCAGAGTCACGAATTTGAAACTGATAAGTTGAGTAGGACGGCAATCTCAGAGAGGATTAACAAAGTGAGCTGGTGTATTGCAGAGAATGGATTTCTGCTTCTTCTCTCAGCAAATACTAAGAAAATTAAATTGTGGATGATTAAGGAATACAAGTCAGATGAATCTGAACAAGTGGTTCCTCTTGGACCTCCTCGATTTTTAAGCTCAGAAAATGTTCTATTGTCTAAAAAGAGTTCCGAAGAAAATGATGCTAATGGAGGTCATTTGGAGTGGACAGAGAACCTATTTCAGGAGGATCCAGTTGATGACAAGATTGCAGGTACAGGCAACGCTTTTCATTCAACATGCAAAAAGGTGTATGCTCATGAAGATAACAGCACTGATATTAACTCCATTTCAAATAATAGTGATGGCCAGACATTTATCTCGGCAGATTAA 717 0.3961 MAESSSSTQWNFYQTLRRQSTRNRAGEREEDDYITAIQFEKRGHHLATGDEGGRVVIFERDDRKNVTSYHHKFLEELDSTPDQRPKFRFKTEFQSHEFETDKLSRTAISERINKVSWCIAENGFLLLLSANTKKIKLWMIKEYKSDESEQVVPLGPPRFLSSENVLLSKKSSEENDANGGHLEWTENLFQEDPVDDKIAGTGNAFHSTCKKVYAHEDNSTDINSISNNSDGQTFISAD 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00532 238 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 6 238 IPR000009 GO:0000159|GO:0019888
Accr12g00532 238 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 115 143 IPR000009 GO:0000159|GO:0019888
Accr12g00532 238 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 218 238 IPR000009 GO:0000159|GO:0019888
Accr12g00532 238 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 38 58 IPR000009 GO:0000159|GO:0019888
Accr12g00532 238 Gene3D - 1 238 IPR015943 GO:0005515
Accr12g00532 238 SUPERFAMILY WD40 repeat-like 31 237 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00532 Accr-Chr12 4985175 4987176 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00532 K04354 - twl:119986324 194.126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr12g00532 12 4985175 4987176 Accr12g00532 12 4985175 4987176 ECH