Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00530 ATGGGTAGCCTTTGGATATGCCATTTCTTTCTGTTTCTGACCATGCTCAATGCTTCTTTCTTCACAGTAGTTCTTGGAGATAATGTCTCAGATTCTTACTGGCTCCTTAAAATGAAATCAAAACTTGTTGACCCATTGGGAGCTCTAAAAGACTGGTCTCCAATTGTTCCTATGTGTAGCTGGTATGGAGTGACATGTTCACTTGATCAGTCTCATGTTATTGGCCTGAACTTGTCTGGTTCAGGAATATCTGGTTCCAGGTCATTTGAGCTCGTTACCCACCTAACTTCTCTTCAAACACTTGATTTGTCTTCAAATTCCCTCACTGGTTCTATTCCTTCTGAGATTGGGGTGCTACAGAATCTAAGAATACTTCAACTTTTCTCGAATTATCTATCTGGCACTATTCCCGCAGAGATAGGTAATTTGAAGAAGTTGGAGATTCTCAGAATAGGTGACAACTTGTTGGCAGGTGAAATCACACCAAGTATAGGTAACTTGAAAGAGTTGAAGGAGTTGGGTTTAGCTTTCTGTTATTTTAATGGAAGCATACCTACTGAGATTGGAAGCTTGAAGAATCTAGTTTCTCTTGATTTGCAGATGAACAGTCTAGAGGGTCACATACCCAAAGAAATTCAAGGCTGTGAAAACCTGCAAAAGTTTGCAGCATCAAACAACTTGCTTGAAGGAGACATACCTTCTTCTTTAGGGTCTCTTGTATCATTGCAAATTCTGAACCTAGCCAATAATAGTCTCTCTGGGTCAATTCCCTCTAGCTTGAGCCATCTCTTCAAGTTGAAATACCTGAATTTGCTTGGAAACAAACTTAGTGGGAAAGTTCCTTCAGAACTTAACAGTTTGACTCAGCTTCAGAAGCTAGACTTGTCCAAAAACAACCTTTCTGGACCAATAAACCTCTTCAATTCCAAACTAAAGAGTCTCCAAACTCTGGTTCTGTCTGATAATTTTTTCACAGGTAATATCCCAGCCAACTTCTGCTTCAGTGGTTCCAAACTTGAGCAACTTTTCTTAGCTCGGAATAAACTTTCTGGTAACTTTCCCTTGGAGTTACTCAGTTGCTCCTCACTTCAACAATTGGATCTTTCTGATAACAGATTTGAAGGGGAACTTCCAACAACCTTGGACAAACTTCAGAATCTCACAGATCTTGCTCTCAACAACAACAGCTTCACAGGATCTCTACCTCCTGAAATTGGAAACATGAGTAACTTGGAGAGCCTCTTCTTGTTTCACAACATGTTCATAGGAAAAATTCCAGTGGAGTTTGGAAGGCTTCAGAGGTTGAAAACCATATACCTTTATGATAACCAGATGTCAGGTCCAATACCAAGAGAGCTAACAAACTGCACAAGCTTAACGGAAATTGACTTCTTTGGGAACCTTTTCTCTGGGCCCATTCCAGAGACCATAGGTAAGCTGAAAGACTTGGTTCTGCTTCAGCTAAGGCAGAATGACTTGTGGGGTCCTATACCTCCAAGTATGGGGTACTGTAAAAGTCTTCAGTTATTGGCATTAGCAGATAATAAATTGTCTGGTTCTATACCATCCACATTTAGTTACCTTTCAGAACTTAGAACCATTACCCTTTACAATAACTCTTTTGAAGGACCACTTCCAGAGTCACTCTTGCTTCTCAAAAACCTCAAAATCATAAATTTTTCTCATAACAGGTTCAGTGGAACCATCCTTCCTCTCACTGGTTCACATTCTCTGAATGCTCTGGACTTGACTAACAATAGCTTCTCTGGTCCCATCCCTTCAAGCCTAGCCATGTCAAGAAATCTCAGCCGTCTAAGACTCGCGCATAACCAACTCACAGGAAGCATTCCATCAGAATTTGGTCAGCTCATTGAACTCAACTTCCTTGATTTGTCTTTTAACAATTTGACAGGAGAGATAGCACCTGAACTCTCAAACTGTAAAAAGATCCAACACTTTCTACTCAATAATAACAGATTGAGAGGGAAAATGCCGCCTTGGTTGGGAAGTTTCCAAGAACTTGGTGAGCTGGATCTCTCATTCAATGACCTCCATGGAAGCGTACCGTCTGCGCTTGGAAACTGTTCAAATTTGCTGAAGCTTTCTCTTCATCACAACAATCTCTCTGGTGAAATACCACAAGAGATTGGAAATCTTACTTCCCTCAATGTCCTTAACTTGCAAAGCAATCATTTCTCAGGCCTCATTCCTTCATCAATTCAGCAATGCAAGAAGCTATATGAACTCAGGCTCTCTGAAAACCTTTTCACAGGCGATATACCTGACGAGCTAGGAGGACTTACAGAACTACAAGTGATATTGGACTTGAGCAAAAACCTCTTATCTGGGGAAATCCCATCTTCACTGGGAAACCTCATGAAGATAGAAAGACTCAATCTTTCTTTCAATAATCTTCAAGGACAAGTTCCTTCTTCTCTTGGGAAACTAACAAGCATTCACATGCTGAATCTCTCGTATAACCATCTACAAGGCCAGATTCCTTCAACATTCTCAAAGTTCCCACTAAGCTCCTTCATGAACAATGACCACTTGTGTGGCCCACCATTGGTATTGTGTTCAGGATCTAAAGGACAAGATCAAGTGGTGCTGTCTAACAAAGAAGTGGCTGCAATCATAGTGGCCATTGTGTTTACTTCTACTTTGATATGCTTAGTGTTGTTGCATATTATGGTGAGAATTTGGTGTAACTGGAGGAAAGTTGCGATTTCAAGTGCTGATGGAGGCATTGGTGAGAGAAAGCGAGAGGAGGCTAGATGGATGTATAGTGATAAGAAAACAAGAAATGGAGAGTACTGGAATATGAACACTTTAGGGTTTAGTACTCCTTCACCGAATAAGCAGAGTCCAGATCAATCAACGGCTTGA 2886 0.4078 MGSLWICHFFLFLTMLNASFFTVVLGDNVSDSYWLLKMKSKLVDPLGALKDWSPIVPMCSWYGVTCSLDQSHVIGLNLSGSGISGSRSFELVTHLTSLQTLDLSSNSLTGSIPSEIGVLQNLRILQLFSNYLSGTIPAEIGNLKKLEILRIGDNLLAGEITPSIGNLKELKELGLAFCYFNGSIPTEIGSLKNLVSLDLQMNSLEGHIPKEIQGCENLQKFAASNNLLEGDIPSSLGSLVSLQILNLANNSLSGSIPSSLSHLFKLKYLNLLGNKLSGKVPSELNSLTQLQKLDLSKNNLSGPINLFNSKLKSLQTLVLSDNFFTGNIPANFCFSGSKLEQLFLARNKLSGNFPLELLSCSSLQQLDLSDNRFEGELPTTLDKLQNLTDLALNNNSFTGSLPPEIGNMSNLESLFLFHNMFIGKIPVEFGRLQRLKTIYLYDNQMSGPIPRELTNCTSLTEIDFFGNLFSGPIPETIGKLKDLVLLQLRQNDLWGPIPPSMGYCKSLQLLALADNKLSGSIPSTFSYLSELRTITLYNNSFEGPLPESLLLLKNLKIINFSHNRFSGTILPLTGSHSLNALDLTNNSFSGPIPSSLAMSRNLSRLRLAHNQLTGSIPSEFGQLIELNFLDLSFNNLTGEIAPELSNCKKIQHFLLNNNRLRGKMPPWLGSFQELGELDLSFNDLHGSVPSALGNCSNLLKLSLHHNNLSGEIPQEIGNLTSLNVLNLQSNHFSGLIPSSIQQCKKLYELRLSENLFTGDIPDELGGLTELQVILDLSKNLLSGEIPSSLGNLMKIERLNLSFNNLQGQVPSSLGKLTSIHMLNLSYNHLQGQIPSTFSKFPLSSFMNNDHLCGPPLVLCSGSKGQDQVVLSNKEVAAIIVAIVFTSTLICLVLLHIMVRIWCNWRKVAISSADGGIGERKREEARWMYSDKKTRNGEYWNMNTLGFSTPSPNKQSPDQSTA 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00530 961 Gene3D Ribonuclease Inhibitor 475 571 IPR032675 -
Accr12g00530 961 Gene3D Ribonuclease Inhibitor 29 182 IPR032675 -
Accr12g00530 961 SMART LRR_sd22_2 143 169 - -
Accr12g00530 961 SMART LRR_sd22_2 95 118 - -
Accr12g00530 961 SMART LRR_sd22_2 191 217 - -
Accr12g00530 961 SMART LRR_sd22_2 432 464 - -
Accr12g00530 961 SMART LRR_sd22_2 360 389 - -
Accr12g00530 961 SMART LRR_sd22_2 287 316 - -
Accr12g00530 961 Gene3D Ribonuclease Inhibitor 378 474 IPR032675 -
Accr12g00530 961 Gene3D Ribonuclease Inhibitor 279 377 IPR032675 -
Accr12g00530 961 Gene3D Ribonuclease Inhibitor 183 278 IPR032675 -
Accr12g00530 961 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 474 570 - -
Accr12g00530 961 Gene3D Ribonuclease Inhibitor 572 868 IPR032675 -
Accr12g00530 961 MobiDBLite consensus disorder prediction 942 961 - -
Accr12g00530 961 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Accr12g00530 961 Pfam Leucine Rich Repeat 97 118 IPR001611 GO:0005515
Accr12g00530 961 ProSiteProfiles Leucine-rich repeat profile. 97 119 IPR001611 GO:0005515
Accr12g00530 961 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 571 863 - -
Accr12g00530 961 SUPERFAMILY L domain-like 54 375 - -
Accr12g00530 961 FunFam Uncharacterized protein 378 473 - -
Accr12g00530 961 SMART LRR_typ_2 552 577 IPR003591 -
Accr12g00530 961 SMART LRR_typ_2 671 695 IPR003591 -
Accr12g00530 961 SMART LRR_typ_2 767 792 IPR003591 -
Accr12g00530 961 SMART LRR_typ_2 287 309 IPR003591 -
Accr12g00530 961 SMART LRR_typ_2 191 214 IPR003591 -
Accr12g00530 961 SMART LRR_typ_2 311 335 IPR003591 -
Accr12g00530 961 SMART LRR_typ_2 719 742 IPR003591 -
Accr12g00530 961 SMART LRR_typ_2 623 647 IPR003591 -
Accr12g00530 961 SMART LRR_typ_2 816 839 IPR003591 -
Accr12g00530 961 SMART LRR_typ_2 384 408 IPR003591 -
Accr12g00530 961 SMART LRR_typ_2 239 263 IPR003591 -
Accr12g00530 961 SMART LRR_typ_2 143 167 IPR003591 -
Accr12g00530 961 SMART LRR_typ_2 95 119 IPR003591 -
Accr12g00530 961 SUPERFAMILY L domain-like 336 660 - -
Accr12g00530 961 PRINTS Leucine-rich repeat signature 98 111 - -
Accr12g00530 961 PRINTS Leucine-rich repeat signature 287 300 - -
Accr12g00530 961 FunFam Uncharacterized protein 186 280 - -
Accr12g00530 961 SUPERFAMILY RNI-like 577 855 - -
Accr12g00530 961 PANTHER LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 773 910 - -
Accr12g00530 961 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 28 185 - -
Accr12g00530 961 Pfam Leucine rich repeat 673 732 IPR001611 GO:0005515
Accr12g00530 961 Pfam Leucine rich repeat 241 300 IPR001611 GO:0005515
Accr12g00530 961 Pfam Leucine rich repeat 313 373 IPR001611 GO:0005515
Accr12g00530 961 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 281 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00530 Accr-Chr12 4967012 4969897 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00530 44 860 Receptor kinase-like Gene Family AT5G46330 34.909 2.69e-127 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00530 - - gmx:100802757 1343.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr12g00530 12 4967012 4969897 Accr12g00530 12 4967012 4969897 ECH