Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00523 ATGGATATGAAGAGATATTCAGGTTTGAGGACAAATCATAGGAATGAAGCATTTGTTTCAGGTTATCAACAACGCCGCACAAGAAGACGACAACGACAATGCATACAAGAAAATCATCATCATCACGTTGCCTCACAACAAACAACAAGCCCACCGAATCATTCTCTGAAATTGGCTTCTTCTTCTTCCCAAAATACCAGCCTACCTCTGTTTCTTCCCGCTTTTATTGCTTTCCTTCTGCTTCTTTCTTTTATCTCTCCTGTTCTCTCTCACTCTTCACCAACCAATCAAACTTTCCGACCTGGTCCTGAGTTGCTCAAGCTTAGGAGGATCAGAGCTCTCCTTAACAAAATCAACAAGCCTTCTATCAAGACAATTCAGAGCACTGATGGGGATTTGATAGATTGTGTTTTATCGCATCAGCAGCCAGCTTTTGACCATCCTGAGCTTAAAGGGAAGAAGCCATTGGATCCACCAGAAAGGCCAAAGGGCCACAAAGACAATGGAGAAGAAGTGATAGAGAGCTTTCAGCTATGGAGTGATTCAGGGGAAACATGCCCAGAAGGAACAGTTCCTATCAGAAGAACAACAGAACAAGACATCCTAAGAGCAAGTTCCGTTCGTAGATTCGGAAGAAAACCAAGAAGAGTACGAAGAGACTCAACTGGCTCTGGTCATGAGCATGCAGTGGTTTTTGTGAACGGAGATCAATATTATGGAGCAAAAGCAGGCATCAACGTGTGGACACCTAAAGTAACTGATGAATACGAATTCAGCTTATCACAAATATGGGTCATTGCGGGCTCTTTTGGTCATGATTTGAATACCGTCGAAGCTGGTTGGCAGGTGAGCCCAGAACTGTATGGGGACAATTATCCTAGGTTCTTCACTTATTGGACTACAGATGCATATCAAGCCACTGGATGCTACAACTTGCTATGTTCAGGTTTTGTGCAGACCAACAATAGAATAGCCATAGGAGCAGCAATATCTCCAAGATCAGCTTATAATGGAAGACAATTTGATATTGGCTTAATGGTTTGGAAGGATCCGAAACACGGGCACTGGTGGCTGGAGTTCGGGCCGGGCCTACTGGTGGGATACTGGCCGGCGTATTTATTCAGTCACCTGAGAAGCCATGCGAGCATGGTGCAATTCGGAGGAGAGATAGTAAACTCGCGATCGAGAGGGTACCACACAGGAACTCAGATGGGAAGCGGGCATTTCGCCGGAGAAGGTTTCAGAAAAGCGGCATATTTCAGGAATTTACAGGTCGTCGATTGGGATAACAATTTGCTTCCTCTCACCAACATTCACCAGCTCGCCGATCATCCCAATTGCTACGATATCACACAAGGCCATAACAATGTTTGGGGCACTTATTTCTATTACGGCGGCCCCGGCAGAAATATCCGATGTCCCTGA 1425 0.4519 MDMKRYSGLRTNHRNEAFVSGYQQRRTRRRQRQCIQENHHHHVASQQTTSPPNHSLKLASSSSQNTSLPLFLPAFIAFLLLLSFISPVLSHSSPTNQTFRPGPELLKLRRIRALLNKINKPSIKTIQSTDGDLIDCVLSHQQPAFDHPELKGKKPLDPPERPKGHKDNGEEVIESFQLWSDSGETCPEGTVPIRRTTEQDILRASSVRRFGRKPRRVRRDSTGSGHEHAVVFVNGDQYYGAKAGINVWTPKVTDEYEFSLSQIWVIAGSFGHDLNTVEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRIAIGAAISPRSAYNGRQFDIGLMVWKDPKHGHWWLEFGPGLLVGYWPAYLFSHLRSHASMVQFGGEIVNSRSRGYHTGTQMGSGHFAGEGFRKAAYFRNLQVVDWDNNLLPLTNIHQLADHPNCYDITQGHNNVWGTYFYYGGPGRNIRCP 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00523 474 FunFam Putative carboxyl-terminal proteinase 247 366 - -
Accr12g00523 474 Gene3D - 249 360 - -
Accr12g00523 474 Pfam Neprosin 256 467 IPR004314 -
Accr12g00523 474 Pfam Neprosin activation peptide 125 231 IPR025521 -
Accr12g00523 474 MobiDBLite consensus disorder prediction 146 167 - -
Accr12g00523 474 MobiDBLite consensus disorder prediction 1 61 - -
Accr12g00523 474 MobiDBLite consensus disorder prediction 40 61 - -
Accr12g00523 474 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 111 470 - -
Accr12g00523 474 MobiDBLite consensus disorder prediction 144 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00523 Accr-Chr12 4889076 4892020 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00523 - - gmx:100782442 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00200 8 2759244 2763612 Accr12g00523 12 4889076 4892020 CCT
Accr8g00200 8 2759244 2763612 Accr12g00523 12 4889076 4892020 ECH
Accr12g00523 12 4889076 4892020 Accr12g00523 12 4889076 4892020 ECH