Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00518 ATGGCCAGGCCTATCATCCGCAAGAACTTTGCCTTACAACAAACTGGCCTCTGCCACGAAACTTCATCTTCCTCCATCACCCTCCAAGCATCAACCTTCCTCGCCAATGGCCACCCAATCCTCACCCAAGTCCCCCCAAACATCACCGCAACCCCCGCCAACAACGCCACCGCCGCCAGCTGCTTCGTCGGCTTCCACACTGACCAGCCCAGCCACCGCCACGTGGTTCCCATCGGAAGGCTCAGTGGGATCAGGTTCATGAGCATTTTCAGATTCAAGGTGTGGTGGAGCACCCATTGGACCGGAACTAAAGGAAGCGATATCGAAAACGAAACCCAAATAATGATGCTGCAGAACTCTGACCACGTGGATCGTCCCTACGTCCTCCTCCTCCCCCTCATCGAAGGACCTTTCAGATCTTCTCTGCAACCCGGTCACAGCGATTACGTGGACATTTGCTTGGAGAGTGGCTCCACGCGTGTCACTGGTTCTACCTTCAGAAGCTGTTTGTACATGCACGCGGGGCATGATCCTTATAACCTAATGAAGGAAGCCATGAAAGTGATCAGAGACCATCTGGGAACGTTCAAGCTTCTGGAAGAGAAAACGCCTCCGAGAATAGTGGATAAGTTTGGATGGTGCACGTGGGACGCGTTTTACCTTACGGTGGATCCAAAAGGAGTTCGAGAAGGTGTGAGAGGCCTTGCCGACGGGGGGTGTCCTCCGGGTTTCGTCATAATCGACGACGGTTGGCAAAGCTTCTGTCACGACCAAGACGACGTGGTTGGAGATAGTGGAAGCTTGAATTGTGCGATACCAGGAGAGCAAATGCTTAATAGGCTTACGAGTTTTGAAGAGAATAGCAAGTTTAAGGAGTATTGTAGTGGGAAGAGGCCTAGTGAGAGAGGGCTCGGTGCCCTTGTGAGGGATTTGAAGGAGGAGTTTGGGAGGTTGGAGGATGTGTATGTGTGGCATGCGTTTTGTGGGTATTGGGGTGGGCTTAGGCCCAATGTTCCGGGACTGCCTGAGGCCCAGGTGGTTGGCGCCAAGGTGACGGAAGGAGAGGCGAAGATGATGAGGGATCTGGCGGTGGTTAGGATATTGGAAGTGGGAGTGGGGTTGGTGTCGCCGGAAGATGCTCACAAGTTGTACGACGGACTCCATTCTCACCTTCAGTCGGTGGGTATTGACGGCGTCAAGATTGATGTCACCCAAATTCTGGGGATGGTATCAGAAGAATATGGGGGTCGTGTAGAACTCTCCAAAGCTTATTACAAAGGCCTAACTGATTCAGTGAAGAAGCACTTCAATGGCAATGGCGTCATCTCCAGCATGCAGCAATGCAACGACTTCTTGTTCCTCGGCACCCAAACCATCTCTCTTGGCCGCATCGGTGATGATTTTTGGTGCATCGACCCTTCCGGAGATCCAAACGGTACGTATTGGCTTCAAGGATGTCACATGGTGCACTGTGCCTATAACAGCTTATGGATGGGAAATTTCATACACCCTGATTGGGACATGTTCCAATCCGACCACCCTTGTGCTGAGTTCCACGCTGCCTCACGCGCCATCTCCGGTGGTCCTGTTTATGTCAGCGACTCTGTTGGGAGGCACAACTTCGCGCTCCTCAACAAGCTCGTCCTCCCTGATGGCACCATTCTCAGGTGCCAACACTATGCCCTCCCCACCAGAGACTGCTTGTTTCAAGACCCTCTTCATGATGCCAAAACCATGCTCAAAATCTGGAACCTCAACAAATATACGGGGGTTTTGGGGGTGTTTAATTGCCAAGGAGGAGGATGGTGCCGTATTTCGAGGAGGAATAAAAGCGCGAGTGAGTGTTCAAAGAGAGTGAGTTGCTTTGCGAGGCCTGAGGATGTCGAATGGAGTCAGGGGATGAGTCCCATATGCGTAACAGAGGAGGATGTGTTTGCCATGTACATGATTAAAGAACAGAACTTGAAGCTGTTGACGTGGTCGGAAAGTGTGGAGATTTCACTCGATCCCTTCGATTATGAGCTTGTGACAGTTTCTCCGGTGACGGTGTTGCCTAAGACTAAGAGGTCGATCCATTTTGCTCCGATTGGGTTGGTGAATATGTTTAACTCGGGAGGTGCAATTCAGAATATGGAATTTGAAAAGCTGGGGAATGATGAGGTGAGAATTGGGGTGAGAGGACATGGAGAGATGAGGGTGTTTGCTTCAGAGAAGCCTGTGAGCTGTAAAGTTGATGGAGTGGACGTTGAATTTGGTTATGAGGATCAGATGGCAAGGCTTCATGTTCCCTGGACTGATTCTTCAAGATCGTGTGTGGTGGAGTAA 2325 0.5114 MARPIIRKNFALQQTGLCHETSSSSITLQASTFLANGHPILTQVPPNITATPANNATAASCFVGFHTDQPSHRHVVPIGRLSGIRFMSIFRFKVWWSTHWTGTKGSDIENETQIMMLQNSDHVDRPYVLLLPLIEGPFRSSLQPGHSDYVDICLESGSTRVTGSTFRSCLYMHAGHDPYNLMKEAMKVIRDHLGTFKLLEEKTPPRIVDKFGWCTWDAFYLTVDPKGVREGVRGLADGGCPPGFVIIDDGWQSFCHDQDDVVGDSGSLNCAIPGEQMLNRLTSFEENSKFKEYCSGKRPSERGLGALVRDLKEEFGRLEDVYVWHAFCGYWGGLRPNVPGLPEAQVVGAKVTEGEAKMMRDLAVVRILEVGVGLVSPEDAHKLYDGLHSHLQSVGIDGVKIDVTQILGMVSEEYGGRVELSKAYYKGLTDSVKKHFNGNGVISSMQQCNDFLFLGTQTISLGRIGDDFWCIDPSGDPNGTYWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSDHPCAEFHAASRAISGGPVYVSDSVGRHNFALLNKLVLPDGTILRCQHYALPTRDCLFQDPLHDAKTMLKIWNLNKYTGVLGVFNCQGGGWCRISRRNKSASECSKRVSCFARPEDVEWSQGMSPICVTEEDVFAMYMIKEQNLKLLTWSESVEISLDPFDYELVTVSPVTVLPKTKRSIHFAPIGLVNMFNSGGAIQNMEFEKLGNDEVRIGVRGHGEMRVFASEKPVSCKVDGVDVEFGYEDQMARLHVPWTDSSRSCVVE 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00518 774 Pfam Raffinose synthase or seed imbibition protein Sip1 30 760 IPR008811 -
Accr12g00518 774 SUPERFAMILY (Trans)glycosidases 206 559 IPR017853 -
Accr12g00518 774 Gene3D Aldolase class I 202 547 IPR013785 -
Accr12g00518 774 PANTHER - 26 766 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00518 Accr-Chr12 4825896 4829438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr12g00518 1 765 Glycoside Hydrolase AT5G40390 59.132 0.0 969
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00518 K06617 - gmx:100798883 1124.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr12g00518 12 4825896 4829438 Accr12g00518 12 4825896 4829438 ECH