Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr12g00511 ATGGCCTCAACTTCGAAAAAAACGACGCCTCGTTCTTTCTCTGCTCCCGTCAATTCAGCTCCTGAAGCTGCCAATGCCGTCGGTGACTGGACTTATCACGCTGATGATCGCCCAGTCGAGAAGGTAGCCATGCCGACTTTGATCAACCCTGTTGATTCCCTTTCAGAACTTTCCACTAATACGAGTGCCACTAAAGGAATCAATTTAATGCCAAGGGCCCAGTCAAGCCACCCTCTAGATCCTTTATCCGCTGCTGAGATCGCCGTGGCAGTGGCTACTGTCAGAGCAGCTGGAGACACACCTGAGGTCAGAGATGCTATGCGCTTCATTGAAGTTGTTCTGCTGGAACCAGAGAAGCACGTTGTTGCACTAGCAGATGCATATTTCTTCCCTCCTTTTCAACCGTCATTAGTTCCTAAGACTAAAGTAGGGCCTACTTTTCCGATTAAGCTGCCTCCCAGATGTGCTAAACTCGTCGTTTACAATAAGAAGTCAAACCAGACTAGTGTGTGGATTGTTCAACTATCAGAAGTTCACGCAGTAACTCGAGGTGGTCATCACAGGGGAAAAGTAATTTCGTCACAGGTTATTCCAGATGTTCAGCCTCCAATGGATGCTGTGGAATATGCAGAATGTGAGGCTGCCGTTAAAGACTTTCCACCATTTAGAGAGGCTATGAAGAGAAGGGGCATTGAAGACATGGACCTTGTAATGGTTGATGCCTGGTGTGTTGGTTATCATAGCGAAGATGATGCGCCCAGCCGAAGACTGGCTAAACCACTTATATTTTGTCGTAGTGAGAGTGATTGCCCAATGGAAAATGGCTATGCACGTCCAGTTGAGGGCATCTATGTGCGTGTTGATATGCAGAAGATGGAGGTGATTGAATTTGAAGACCGTAAACTTGTTCCTCTGCCTCCGGTTGATCCCTTGAGGAACTATACTGCAGGTGAAACAAGAGGTGGCTCTGATAGAAGTGATGTAAAAGCCTTACAAATCATTCAGCCTGATGGTCCAAGCTTTCGAGTTAATGGTCGCTACGTAGAATGGCAGAAGTGGAATTTTCGAATTGGATTTACACCCAGAGAAGGCTTGGTTATACATTCTGTTGCTTATGTTGATGGTAGTCGAGGGCGAAGGCCTGTTGCACATAGGTTGAGTTTTGTGGAGATGGTTGTGCCGTATGGAGATCCAGATGATCCACATTACAGAAAAAATGGTTTTGATGCTGGGGAAGATGGCTTTGGGAAAAATGCACATTCTCTCAAGAAGGGATGTGATTGTTTGGGGGCCATTAAATATTTTAATGCTCACTTCACAAATTTCACTGGAGGAGTTGAGACAATTGAAAATTGTGTTTGTTTGAATGAAGAGGATCATGGAATCCTTTGGAAGCATCAAGACTGGAGAACTGGCTTAGCAGAAGTCCGAAGGTCAAGAAGACTTTCGGTTTCTTTTATATGTACAGTGGCCAACTATGAGTATGGATTTTTCTGGCACTTTTATCAGGATGGAAAAATTGAAGCTGAGGTCAAGCTAACTGGAATCCTCAGCTTAGGAGCGTTGGTACCTGGAGAGTCTAGAAAATATGGCACCACGATTGCACCAGGCTTGTATGCTCCCGTCCACCAACACTTCTTTGTTGCTCGCATGGACATGGCTGTTGATTCTAAACCTGGTGAAGCTTTCAATCAGGTTGTGGAGATCAATTTGAGAGTTGAGAAGCCTGGGGATGATAATGTTCACAATAATGCATTCTATGCGGAAGAGACTCTGCTCAAATCTGAATCGGAAGCCATGAGGGACTGCAATCCTTTGACCGCCCGACACTGGATTGTGAGGAATACCAGAACAGGAAATAGAACGGGACAATTAACAGGATACAAGCTTGTATCTGGTTCAAATTGCTTACCATTAGCAGGCCCTGAGGCCATGTTCTTAAGGAGAGCTGCTTTCTTGAAGCATAATCTTTGGGTGACGTCATATTCATGCGACGAGATGTTCCCAGGAGGGGAATTCCCTAATCAAAATCCTCGTATAGGTGAAGGACTAGCTTCATGGGTGAAGAAGAATCGATCTTTGGAGGAAGCTGATATAGTTCTCTGGTACGTAGTTGGAATAACTCGTGTGCCTCGGCTAGAAGACTGGCCTGTGATGCCAGTAGAGCGCATTGGTTTTATGCTCATGCCTCATGGATTCTTCAATTGCTCGCCTGCTGTAGATGTGCCCCGTAATCCCTGTGAGATGGACAATGAAAGCAAAGACAACAACAAGCCCATCCACGCTGGATTAGGGTCTAAGCTTTAG 2307 0.4556 MASTSKKTTPRSFSAPVNSAPEAANAVGDWTYHADDRPVEKVAMPTLINPVDSLSELSTNTSATKGINLMPRAQSSHPLDPLSAAEIAVAVATVRAAGDTPEVRDAMRFIEVVLLEPEKHVVALADAYFFPPFQPSLVPKTKVGPTFPIKLPPRCAKLVVYNKKSNQTSVWIVQLSEVHAVTRGGHHRGKVISSQVIPDVQPPMDAVEYAECEAAVKDFPPFREAMKRRGIEDMDLVMVDAWCVGYHSEDDAPSRRLAKPLIFCRSESDCPMENGYARPVEGIYVRVDMQKMEVIEFEDRKLVPLPPVDPLRNYTAGETRGGSDRSDVKALQIIQPDGPSFRVNGRYVEWQKWNFRIGFTPREGLVIHSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPDDPHYRKNGFDAGEDGFGKNAHSLKKGCDCLGAIKYFNAHFTNFTGGVETIENCVCLNEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYGFFWHFYQDGKIEAEVKLTGILSLGALVPGESRKYGTTIAPGLYAPVHQHFFVARMDMAVDSKPGEAFNQVVEINLRVEKPGDDNVHNNAFYAEETLLKSESEAMRDCNPLTARHWIVRNTRTGNRTGQLTGYKLVSGSNCLPLAGPEAMFLRRAAFLKHNLWVTSYSCDEMFPGGEFPNQNPRIGEGLASWVKKNRSLEEADIVLWYVVGITRVPRLEDWPVMPVERIGFMLMPHGFFNCSPAVDVPRNPCEMDNESKDNNKPIHAGLGSKL 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr12g00511 768 Gene3D - 207 309 - -
Accr12g00511 768 FunFam Amine oxidase 321 746 - -
Accr12g00511 768 MobiDBLite consensus disorder prediction 1 20 - -
Accr12g00511 768 FunFam Amine oxidase 61 204 - -
Accr12g00511 768 Gene3D Copper amine oxidase, catalytic domain 317 744 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Accr12g00511 768 SUPERFAMILY Amine oxidase catalytic domain 325 744 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Accr12g00511 768 MobiDBLite consensus disorder prediction 1 19 - -
Accr12g00511 768 PANTHER COPPER AMINE OXIDASE 72 754 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Accr12g00511 768 SUPERFAMILY Amine oxidase N-terminal region 201 318 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Accr12g00511 768 SUPERFAMILY Amine oxidase N-terminal region 75 203 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Accr12g00511 768 MobiDBLite consensus disorder prediction 747 768 - -
Accr12g00511 768 Pfam Copper amine oxidase, enzyme domain 331 739 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Accr12g00511 768 Gene3D - 54 204 - -
Accr12g00511 768 Pfam Copper amine oxidase, N3 domain 202 305 IPR015802 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Accr12g00511 768 FunFam Amine oxidase 207 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr12g00511 Accr-Chr12 4767102 4771555 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr12g00511 K00276 - twl:119985177 1311.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr12g00511 12 4767102 4771555 Accr12g00511 12 4767102 4771555 ECH